Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164442174-164553011

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sdc4 2 164424247 to 164443188 18941 - protein coding gene syndecan 4
Cpgi12660 2 164442712 to 164443486 774 CpG island CpG island 12660
Tssr27482 2 164443177 to 164443194 17 - TSS region transcription start site region 27482
Tssr27483 2 164443296 to 164443341 45 - TSS region transcription start site region 27483
Tssr21589 2 164443370 to 164443405 35 + TSS region transcription start site region 21589
Tssr21590 2 164443407 to 164443418 11 + TSS region transcription start site region 21590
Tssr27484 2 164443913 to 164443928 15 - TSS region transcription start site region 27484
Tssr27485 2 164444074 to 164444085 11 - TSS region transcription start site region 27485
Tssr21591 2 164445422 to 164445433 11 + TSS region transcription start site region 21591
Tssr21592 2 164456936 to 164456988 52 + TSS region transcription start site region 21592
Sys1 2 164456981 to 164479637 22656 + protein coding gene SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
Gm14302 2 164459896 to 164460955 1059 - antisense lncRNA gene predicted gene 14302
Cpgi12661 2 164460793 to 164461762 969 CpG island CpG island 12661
Tssr21593 2 164460945 to 164461018 73 + TSS region transcription start site region 21593
Gm20458 2 164460967 to 164490760 29793 + protein coding gene predicted gene 20458
Tssr21594 2 164461019 to 164461058 39 + TSS region transcription start site region 21594
Tssr21595 2 164461063 to 164461074 11 + TSS region transcription start site region 21595
Tssr21596 2 164461081 to 164461091 10 + TSS region transcription start site region 21596
Tssr21597 2 164461231 to 164461284 53 + TSS region transcription start site region 21597
Tssr27486 2 164461575 to 164461586 11 - TSS region transcription start site region 27486
Trp53tg5 2 164470301 to 164473724 3423 - protein coding gene transformation related protein 53 target 5
Tssr27487 2 164473701 to 164473712 11 - TSS region transcription start site region 27487
Tssr27488 2 164473714 to 164473730 16 - TSS region transcription start site region 27488
Tssr27489 2 164478372 to 164478396 24 - TSS region transcription start site region 27489
Gm10725 2 164485529 to 164486870 1341 - protein coding gene predicted gene 10725
Cpgi12662 2 164485747 to 164487410 1663 CpG island CpG island 12662
Tssr21598 2 164486067 to 164486095 28 + TSS region transcription start site region 21598
Dbndd2 2 164486106 to 164493319 7213 + protein coding gene dysbindin (dystrobrevin binding protein 1) domain containing 2
Tssr21599 2 164486519 to 164486655 136 + TSS region transcription start site region 21599
Tssr21600 2 164486856 to 164486898 42 + TSS region transcription start site region 21600
Tssr21601 2 164488103 to 164488127 24 + TSS region transcription start site region 21601
Tssr21602 2 164488197 to 164488200 3 + TSS region transcription start site region 21602
Tssr21603 2 164492032 to 164492034 2 + TSS region transcription start site region 21603
Cpgi12663 2 164497174 to 164498011 837 CpG island CpG island 12663
Tssr27490 2 164497444 to 164497475 31 - TSS region transcription start site region 27490
Tssr21604 2 164497518 to 164497560 42 + TSS region transcription start site region 21604
Pigt 2 164497520 to 164508301 10781 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class T
Tssr21605 2 164497961 to 164497984 23 + TSS region transcription start site region 21605
Tssr21606 2 164501502 to 164501516 14 + TSS region transcription start site region 21606
Tssr21607 2 164502577 to 164502596 19 + TSS region transcription start site region 21607
Tssr21608 2 164502620 to 164502636 16 + TSS region transcription start site region 21608
Cpgi12664 2 164507311 to 164507512 201 CpG island CpG island 12664
Tssr21609 2 164507392 to 164507433 41 + TSS region transcription start site region 21609
Tssr21610 2 164508248 to 164508258 10 + TSS region transcription start site region 21610
Tssr27491 2 164512171 to 164512182 11 - TSS region transcription start site region 27491
Tssr27492 2 164512204 to 164512218 14 - TSS region transcription start site region 27492
2310007H11Rik 2 164522216 to 164523756 1540 unclassified gene RIKEN cDNA 2310007H11 gene
Tssr21611 2 164523663 to 164523684 21 + TSS region transcription start site region 21611
Tssr756 2 164523690 to 164523708 18 + TSS region transcription start site region 756
Gm36090 2 164533247 to 164549375 16128 - lncRNA gene predicted gene, 36090
Tssr27493 2 164549320 to 164549335 15 - TSS region transcription start site region 27493
Tssr27494 2 164549339 to 164549350 11 - TSS region transcription start site region 27494
Gm14317 2 164550530 to 164559730 9200 + lincRNA gene predicted gene 14317