Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164264252-164514990

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194 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hylaq2 2 151799021 to 164277226 12478205 QTL Hyperlocomotor activity related QTL 2
Tssr21549 2 164275952 to 164275958 6 + TSS region transcription start site region 21549
Svs4 2 164275956 to 164278307 2351 - protein coding gene seminal vesicle secretory protein 4
Tssr27409 2 164275978 to 164275996 18 - TSS region transcription start site region 27409
Tssr27410 2 164276001 to 164276026 25 - TSS region transcription start site region 27410
Tssr27411 2 164276038 to 164276051 13 - TSS region transcription start site region 27411
Tssr21550 2 164276058 to 164276070 12 + TSS region transcription start site region 21550
Tssr27412 2 164276076 to 164276078 2 - TSS region transcription start site region 27412
Tssr27413 2 164276083 to 164276093 10 - TSS region transcription start site region 27413
Tssr27414 2 164276101 to 164276105 4 - TSS region transcription start site region 27414
Tssr27415 2 164276117 to 164276124 7 - TSS region transcription start site region 27415
Tssr27416 2 164277077 to 164277082 5 - TSS region transcription start site region 27416
Tssr27417 2 164277086 to 164277093 7 - TSS region transcription start site region 27417
Tssr21551 2 164277102 to 164277135 33 + TSS region transcription start site region 21551
D2Mit29 2 164277112 to 164277226 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 29
Tssr21552 2 164277146 to 164277205 59 + TSS region transcription start site region 21552
Tssr27418 2 164277157 to 164277164 7 - TSS region transcription start site region 27418
Tssr27419 2 164277167 to 164277173 6 - TSS region transcription start site region 27419
Tssr27420 2 164277187 to 164277194 7 - TSS region transcription start site region 27420
Tssr27421 2 164277211 to 164277224 13 - TSS region transcription start site region 27421
Tssr27422 2 164277229 to 164277263 34 - TSS region transcription start site region 27422
Tssr27423 2 164277267 to 164277292 25 - TSS region transcription start site region 27423
Tssr27424 2 164277297 to 164277305 8 - TSS region transcription start site region 27424
Tssr27425 2 164277318 to 164277323 5 - TSS region transcription start site region 27425
Tssr27426 2 164277576 to 164277581 5 - TSS region transcription start site region 27426
Tssr27427 2 164278254 to 164278260 6 - TSS region transcription start site region 27427
Tssr27428 2 164278300 to 164278312 12 - TSS region transcription start site region 27428
Tssr27429 2 164278326 to 164278336 10 - TSS region transcription start site region 27429
Tssr27430 2 164278422 to 164278430 8 - TSS region transcription start site region 27430
Tssr21553 2 164289197 to 164289207 10 + TSS region transcription start site region 21553
Tssr21554 2 164289216 to 164289227 11 + TSS region transcription start site region 21554
Tssr21555 2 164289261 to 164289273 12 + TSS region transcription start site region 21555
Svs3a 2 164289268 to 164291500 2232 + protein coding gene seminal vesicle secretory protein 3A
Tssr740 2 164289588 to 164289593 5 + TSS region transcription start site region 740
Tssr21556 2 164289609 to 164289620 11 + TSS region transcription start site region 21556
Tssr741 2 164289753 to 164289762 9 + TSS region transcription start site region 741
Tssr742 2 164290274 to 164290281 7 + TSS region transcription start site region 742
Tssr743 2 164316691 to 164316698 7 + TSS region transcription start site region 743
Tssr21557 2 164316707 to 164316716 9 + TSS region transcription start site region 21557
Tssr21558 2 164316718 to 164316727 9 + TSS region transcription start site region 21558
Tssr21559 2 164316730 to 164316756 26 + TSS region transcription start site region 21559
Svs6 2 164316751 to 164318450 1699 + protein coding gene seminal vesicle secretory protein 6
Tssr21560 2 164316792 to 164316797 5 + TSS region transcription start site region 21560
Tssr21561 2 164317474 to 164317486 12 + TSS region transcription start site region 21561
Tssr27431 2 164317566 to 164317569 3 - TSS region transcription start site region 27431
Tssr27432 2 164327622 to 164327623 1 - TSS region transcription start site region 27432
Tssr21562 2 164332723 to 164332736 13 + TSS region transcription start site region 21562
Tssr21563 2 164332740 to 164332745 5 + TSS region transcription start site region 21563
Tssr21564 2 164332759 to 164332776 17 + TSS region transcription start site region 21564
Svs5 2 164332765 to 164334394 1629 + protein coding gene seminal vesicle secretory protein 5
Tssr21565 2 164332784 to 164332789 5 + TSS region transcription start site region 21565
Tssr21566 2 164332794 to 164332800 6 + TSS region transcription start site region 21566
Tssr21567 2 164332808 to 164332812 4 + TSS region transcription start site region 21567
Tssr21568 2 164332818 to 164332821 3 + TSS region transcription start site region 21568
Tssr21569 2 164333295 to 164333326 31 + TSS region transcription start site region 21569
Tssr744 2 164333329 to 164333334 5 + TSS region transcription start site region 744
Tssr27433 2 164333353 to 164333356 3 - TSS region transcription start site region 27433
Tssr21570 2 164333357 to 164333368 11 + TSS region transcription start site region 21570
Tssr745 2 164333372 to 164333377 5 + TSS region transcription start site region 745
Tssr27434 2 164333376 to 164333386 10 - TSS region transcription start site region 27434
Tssr746 2 164333383 to 164333384 1 + TSS region transcription start site region 746
Tssr21571 2 164333388 to 164333396 8 + TSS region transcription start site region 21571
Tssr747 2 164333396 to 164333397 1 - TSS region transcription start site region 747
Tssr27435 2 164333404 to 164333411 7 - TSS region transcription start site region 27435
Tssr21572 2 164333405 to 164333410 5 + TSS region transcription start site region 21572
Tssr748 2 164333417 to 164333422 5 + TSS region transcription start site region 748
Tssr27436 2 164333423 to 164333428 5 - TSS region transcription start site region 27436
Tssr21573 2 164333434 to 164333441 7 + TSS region transcription start site region 21573
Tssr27437 2 164333444 to 164333469 25 - TSS region transcription start site region 27437
Tssr749 2 164333449 to 164333459 10 + TSS region transcription start site region 749
Tssr750 2 164333462 to 164333476 14 + TSS region transcription start site region 750
Tssr27438 2 164333474 to 164333486 12 - TSS region transcription start site region 27438
Tssr27439 2 164333488 to 164333491 3 - TSS region transcription start site region 27439
Tssr27440 2 164333498 to 164333507 9 - TSS region transcription start site region 27440
Tssr21574 2 164333498 to 164333503 5 + TSS region transcription start site region 21574
Tssr751 2 164333516 to 164333528 12 + TSS region transcription start site region 751
Tssr27441 2 164333553 to 164333556 3 - TSS region transcription start site region 27441
Tssr27442 2 164333561 to 164333566 5 - TSS region transcription start site region 27442
Tssr752 2 164333585 to 164333590 5 + TSS region transcription start site region 752
Tssr753 2 164333592 to 164333600 8 + TSS region transcription start site region 753
Tssr27443 2 164333624 to 164333625 1 - TSS region transcription start site region 27443
Tssr27444 2 164333633 to 164333636 3 - TSS region transcription start site region 27444
Tssr27445 2 164334249 to 164334262 13 - TSS region transcription start site region 27445
Tssr754 2 164334264 to 164334269 5 + TSS region transcription start site region 754
Tssr21575 2 164334276 to 164334283 7 + TSS region transcription start site region 21575
Tssr21576 2 164334292 to 164334304 12 + TSS region transcription start site region 21576
Tssr27446 2 164334293 to 164334309 16 - TSS region transcription start site region 27446
Tssr21577 2 164334311 to 164334344 33 + TSS region transcription start site region 21577
Tssr27447 2 164334388 to 164334395 7 - TSS region transcription start site region 27447
Tssr27448 2 164335002 to 164335005 3 - TSS region transcription start site region 27448
Slpi 2 164354070 to 164356507 2437 - protein coding gene secretory leukocyte peptidase inhibitor
Mir7678 2 164354313 to 164354383 70 - miRNA gene microRNA 7678
Tssr27449 2 164356284 to 164356298 14 - TSS region transcription start site region 27449
Tssr27450 2 164372735 to 164372759 24 - TSS region transcription start site region 27450
Tssr755 2 164373352 to 164373391 39 - TSS region transcription start site region 755
Cpgi12651 2 164389252 to 164389990 738 CpG island CpG island 12651
Matn4 2 164389393 to 164405160 15767 - protein coding gene matrilin 4
Cpgi12652 2 164392577 to 164393552 975 CpG island CpG island 12652
Cpgi12653 2 164397146 to 164397531 385 CpG island CpG island 12653
Cpgi12654 2 164398005 to 164398326 321 CpG island CpG island 12654
Cpgi12655 2 164400087 to 164401301 1214 CpG island CpG island 12655
Cpgi12656 2 164403063 to 164403271 208 CpG island CpG island 12656
Rbpjl 2 164403194 to 164415448 12254 + protein coding gene recombination signal binding protein for immunoglobulin kappa J region-like
Tssr21578 2 164403202 to 164403219 17 + TSS region transcription start site region 21578
Cpgi12657 2 164404328 to 164404998 670 CpG island CpG island 12657
Tssr21579 2 164404370 to 164404400 30 + TSS region transcription start site region 21579
Tssr27451 2 164404606 to 164404621 15 - TSS region transcription start site region 27451
Tssr27452 2 164404812 to 164404824 12 - TSS region transcription start site region 27452
Tssr27453 2 164404825 to 164404857 32 - TSS region transcription start site region 27453
Tssr21580 2 164405264 to 164405297 33 + TSS region transcription start site region 21580
Cpgi12658 2 164407842 to 164408321 479 CpG island CpG island 12658
Cpgi12659 2 164414025 to 164414810 785 CpG island CpG island 12659
Sdc4 2 164424247 to 164443188 18941 - protein coding gene syndecan 4
Tssr27454 2 164424284 to 164424287 3 - TSS region transcription start site region 27454
Tssr27455 2 164425124 to 164425140 16 - TSS region transcription start site region 27455
Tssr27456 2 164425176 to 164425215 39 - TSS region transcription start site region 27456
Tssr21581 2 164425227 to 164425251 24 + TSS region transcription start site region 21581
Tssr27457 2 164425255 to 164425266 11 - TSS region transcription start site region 27457
Tssr27458 2 164425300 to 164425318 18 - TSS region transcription start site region 27458
Tssr27459 2 164425338 to 164425360 22 - TSS region transcription start site region 27459
Tssr27460 2 164425367 to 164425380 13 - TSS region transcription start site region 27460
Tssr21582 2 164425405 to 164425428 23 + TSS region transcription start site region 21582
Tssr27461 2 164425442 to 164425465 23 - TSS region transcription start site region 27461
Tssr27462 2 164425519 to 164425532 13 - TSS region transcription start site region 27462
Tssr27463 2 164425562 to 164425584 22 - TSS region transcription start site region 27463
Tssr27464 2 164425605 to 164425616 11 - TSS region transcription start site region 27464
Tssr27465 2 164425653 to 164425683 30 - TSS region transcription start site region 27465
Tssr21583 2 164425727 to 164425761 34 + TSS region transcription start site region 21583
Tssr27466 2 164425768 to 164425779 11 - TSS region transcription start site region 27466
Tssr21584 2 164425771 to 164425794 23 + TSS region transcription start site region 21584
Tssr21585 2 164425807 to 164425846 39 + TSS region transcription start site region 21585
Tssr27467 2 164425812 to 164425828 16 - TSS region transcription start site region 27467
Tssr27468 2 164425860 to 164425874 14 - TSS region transcription start site region 27468
Tssr21586 2 164425878 to 164425915 37 + TSS region transcription start site region 21586
Tssr21587 2 164425967 to 164426011 44 + TSS region transcription start site region 21587
Tssr27469 2 164425975 to 164425986 11 - TSS region transcription start site region 27469
Tssr27470 2 164425991 to 164426046 55 - TSS region transcription start site region 27470
Tssr27471 2 164426073 to 164426098 25 - TSS region transcription start site region 27471
Tssr21588 2 164426115 to 164426160 45 + TSS region transcription start site region 21588
Tssr27472 2 164426146 to 164426161 15 - TSS region transcription start site region 27472
Tssr27473 2 164426187 to 164426204 17 - TSS region transcription start site region 27473
Tssr27474 2 164426209 to 164426229 20 - TSS region transcription start site region 27474
Tssr27475 2 164426236 to 164426249 13 - TSS region transcription start site region 27475
Tssr27476 2 164428921 to 164428977 56 - TSS region transcription start site region 27476
Tssr27477 2 164431219 to 164431230 11 - TSS region transcription start site region 27477
Tssr27478 2 164431245 to 164431256 11 - TSS region transcription start site region 27478
Tssr27479 2 164431261 to 164431273 12 - TSS region transcription start site region 27479
Tssr27480 2 164431289 to 164431308 19 - TSS region transcription start site region 27480
Tssr27481 2 164432208 to 164432221 13 - TSS region transcription start site region 27481
Cpgi12660 2 164442712 to 164443486 774 CpG island CpG island 12660
Tssr27482 2 164443177 to 164443194 17 - TSS region transcription start site region 27482
Tssr27483 2 164443296 to 164443341 45 - TSS region transcription start site region 27483
Tssr21589 2 164443370 to 164443405 35 + TSS region transcription start site region 21589
Tssr21590 2 164443407 to 164443418 11 + TSS region transcription start site region 21590
Tssr27484 2 164443913 to 164443928 15 - TSS region transcription start site region 27484
Tssr27485 2 164444074 to 164444085 11 - TSS region transcription start site region 27485
Tssr21591 2 164445422 to 164445433 11 + TSS region transcription start site region 21591
Tssr21592 2 164456936 to 164456988 52 + TSS region transcription start site region 21592
Sys1 2 164456981 to 164479637 22656 + protein coding gene SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
Gm14302 2 164459896 to 164460955 1059 - antisense lncRNA gene predicted gene 14302
Cpgi12661 2 164460793 to 164461762 969 CpG island CpG island 12661
Tssr21593 2 164460945 to 164461018 73 + TSS region transcription start site region 21593
Gm20458 2 164460967 to 164490760 29793 + protein coding gene predicted gene 20458
Tssr21594 2 164461019 to 164461058 39 + TSS region transcription start site region 21594
Tssr21595 2 164461063 to 164461074 11 + TSS region transcription start site region 21595
Tssr21596 2 164461081 to 164461091 10 + TSS region transcription start site region 21596
Tssr21597 2 164461231 to 164461284 53 + TSS region transcription start site region 21597
Tssr27486 2 164461575 to 164461586 11 - TSS region transcription start site region 27486
Trp53tg5 2 164470301 to 164473724 3423 - protein coding gene transformation related protein 53 target 5
Tssr27487 2 164473701 to 164473712 11 - TSS region transcription start site region 27487
Tssr27488 2 164473714 to 164473730 16 - TSS region transcription start site region 27488
Tssr27489 2 164478372 to 164478396 24 - TSS region transcription start site region 27489
Gm10725 2 164485529 to 164486870 1341 - protein coding gene predicted gene 10725
Cpgi12662 2 164485747 to 164487410 1663 CpG island CpG island 12662
Tssr21598 2 164486067 to 164486095 28 + TSS region transcription start site region 21598
Dbndd2 2 164486106 to 164493319 7213 + protein coding gene dysbindin (dystrobrevin binding protein 1) domain containing 2
Tssr21599 2 164486519 to 164486655 136 + TSS region transcription start site region 21599
Tssr21600 2 164486856 to 164486898 42 + TSS region transcription start site region 21600
Tssr21601 2 164488103 to 164488127 24 + TSS region transcription start site region 21601
Tssr21602 2 164488197 to 164488200 3 + TSS region transcription start site region 21602
Tssr21603 2 164492032 to 164492034 2 + TSS region transcription start site region 21603
Cpgi12663 2 164497174 to 164498011 837 CpG island CpG island 12663
Tssr27490 2 164497444 to 164497475 31 - TSS region transcription start site region 27490
Tssr21604 2 164497518 to 164497560 42 + TSS region transcription start site region 21604
Pigt 2 164497520 to 164508301 10781 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class T
Tssr21605 2 164497961 to 164497984 23 + TSS region transcription start site region 21605
Tssr21606 2 164501502 to 164501516 14 + TSS region transcription start site region 21606
Tssr21607 2 164502577 to 164502596 19 + TSS region transcription start site region 21607
Tssr21608 2 164502620 to 164502636 16 + TSS region transcription start site region 21608
Cpgi12664 2 164507311 to 164507512 201 CpG island CpG island 12664
Tssr21609 2 164507392 to 164507433 41 + TSS region transcription start site region 21609
Tssr21610 2 164508248 to 164508258 10 + TSS region transcription start site region 21610
Tssr27491 2 164512171 to 164512182 11 - TSS region transcription start site region 27491
Tssr27492 2 164512204 to 164512218 14 - TSS region transcription start site region 27492