Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:164140576-164240590

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stk4 2 164074113 to 164155521 81408 + protein coding gene serine/threonine kinase 4
Tssr21523 2 164154622 to 164154645 23 + TSS region transcription start site region 21523
n-R5s207 2 164157404 to 164157521 117 - rRNA gene nuclear encoded rRNA 5S 207
Kcns1 2 164163619 to 164171113 7494 - protein coding gene K+ voltage-gated channel, subfamily S, 1
Cpgi12649 2 164167631 to 164169116 1485 CpG island CpG island 12649
Cpgi12650 2 164170932 to 164171292 360 CpG island CpG island 12650
Wfdc5 2 164176327 to 164182742 6415 - protein coding gene WAP four-disulfide core domain 5
A730032A03Rik 2 164177584 to 164196564 18980 + antisense lncRNA gene RIKEN cDNA A730032A03 gene
Tssr27352 2 164182592 to 164182612 20 - TSS region transcription start site region 27352
Tssr27353 2 164182618 to 164182634 16 - TSS region transcription start site region 27353
Tssr27354 2 164182638 to 164182652 14 - TSS region transcription start site region 27354
Tssr27355 2 164182667 to 164182686 19 - TSS region transcription start site region 27355
Tssr27356 2 164182713 to 164182720 7 - TSS region transcription start site region 27356
Tssr27357 2 164182729 to 164182766 37 - TSS region transcription start site region 27357
Wfdc12 2 164189231 to 164190558 1327 - protein coding gene WAP four-disulfide core domain 12
Tssr21524 2 164189597 to 164189600 3 + TSS region transcription start site region 21524
Tssr27358 2 164190576 to 164190590 14 - TSS region transcription start site region 27358
Tssr27359 2 164190601 to 164190614 13 - TSS region transcription start site region 27359
Wfdc15a 2 164198872 to 164200117 1245 - protein coding gene WAP four-disulfide core domain 15A
Tssr27360 2 164200076 to 164200150 74 - TSS region transcription start site region 27360
Tssr735 2 164212574 to 164212580 6 + TSS region transcription start site region 735
Wfdc15b 2 164214454 to 164221660 7206 - protein coding gene WAP four-disulfide core domain 15B
Tssr27361 2 164221605 to 164221677 72 - TSS region transcription start site region 27361
D2Mit454 2 164235081 to 164235191 110 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 454
Svs2 2 164235929 to 164238341 2412 - protein coding gene seminal vesicle secretory protein 2
Tssr27362 2 164236098 to 164236118 20 - TSS region transcription start site region 27362
Tssr27363 2 164236148 to 164236163 15 - TSS region transcription start site region 27363
Tssr21525 2 164236925 to 164236958 33 + TSS region transcription start site region 21525
Tssr21526 2 164236982 to 164236995 13 + TSS region transcription start site region 21526
Tssr27364 2 164236989 to 164237021 32 - TSS region transcription start site region 27364
Tssr27365 2 164237030 to 164237041 11 - TSS region transcription start site region 27365
Tssr27366 2 164237065 to 164237083 18 - TSS region transcription start site region 27366
Tssr27367 2 164237111 to 164237127 16 - TSS region transcription start site region 27367
Tssr27368 2 164237130 to 164237140 10 - TSS region transcription start site region 27368
Tssr27369 2 164237148 to 164237162 14 - TSS region transcription start site region 27369
Tssr27370 2 164237165 to 164237166 1 - TSS region transcription start site region 27370
Tssr27371 2 164237170 to 164237179 9 - TSS region transcription start site region 27371
Tssr21527 2 164237174 to 164237185 11 + TSS region transcription start site region 21527
Tssr21528 2 164237203 to 164237207 4 + TSS region transcription start site region 21528
Tssr27372 2 164237203 to 164237210 7 - TSS region transcription start site region 27372
Tssr21529 2 164237209 to 164237210 1 + TSS region transcription start site region 21529
Tssr21530 2 164237214 to 164237218 4 + TSS region transcription start site region 21530
Tssr27373 2 164237214 to 164237221 7 - TSS region transcription start site region 27373
Tssr21531 2 164237224 to 164237256 32 + TSS region transcription start site region 21531
Tssr27374 2 164237232 to 164237239 7 - TSS region transcription start site region 27374
Tssr27375 2 164237244 to 164237255 11 - TSS region transcription start site region 27375
Tssr21532 2 164237263 to 164237272 9 + TSS region transcription start site region 21532
Tssr27376 2 164237265 to 164237274 9 - TSS region transcription start site region 27376
Tssr27377 2 164237285 to 164237295 10 - TSS region transcription start site region 27377
Tssr21533 2 164237286 to 164237299 13 + TSS region transcription start site region 21533
Tssr27378 2 164237303 to 164237323 20 - TSS region transcription start site region 27378
Tssr21534 2 164237305 to 164237307 2 + TSS region transcription start site region 21534
Tssr21535 2 164237310 to 164237314 4 + TSS region transcription start site region 21535
Tssr27379 2 164237326 to 164237340 14 - TSS region transcription start site region 27379
Tssr21536 2 164237331 to 164237339 8 + TSS region transcription start site region 21536
Tssr27380 2 164237347 to 164237389 42 - TSS region transcription start site region 27380
Tssr21537 2 164237413 to 164237430 17 + TSS region transcription start site region 21537
Tssr27381 2 164237427 to 164237430 3 - TSS region transcription start site region 27381
Tssr21538 2 164237437 to 164237444 7 + TSS region transcription start site region 21538
Tssr27382 2 164237440 to 164237450 10 - TSS region transcription start site region 27382
Tssr27383 2 164237454 to 164237467 13 - TSS region transcription start site region 27383
Tssr736 2 164237456 to 164237461 5 + TSS region transcription start site region 736
Tssr21539 2 164237472 to 164237492 20 + TSS region transcription start site region 21539
Tssr27384 2 164237495 to 164237520 25 - TSS region transcription start site region 27384
Tssr737 2 164237503 to 164237506 3 + TSS region transcription start site region 737
Tssr21540 2 164237513 to 164237520 7 + TSS region transcription start site region 21540
Tssr21541 2 164237523 to 164237528 5 + TSS region transcription start site region 21541
Tssr27385 2 164237523 to 164237554 31 - TSS region transcription start site region 27385
Tssr21542 2 164237596 to 164237603 7 + TSS region transcription start site region 21542
Tssr21543 2 164237604 to 164237638 34 + TSS region transcription start site region 21543
Tssr21544 2 164237660 to 164237665 5 + TSS region transcription start site region 21544
Tssr27386 2 164237677 to 164237696 19 - TSS region transcription start site region 27386
Tssr27387 2 164237697 to 164237711 14 - TSS region transcription start site region 27387
Tssr27388 2 164237721 to 164237724 3 - TSS region transcription start site region 27388
Tssr27389 2 164237725 to 164237744 19 - TSS region transcription start site region 27389
Tssr27390 2 164237747 to 164237780 33 - TSS region transcription start site region 27390
Tssr21545 2 164237766 to 164237774 8 + TSS region transcription start site region 21545
Tssr21546 2 164237803 to 164237812 9 + TSS region transcription start site region 21546
Tssr27391 2 164237819 to 164237831 12 - TSS region transcription start site region 27391
Tssr27392 2 164237847 to 164237852 5 - TSS region transcription start site region 27392
Tssr27393 2 164237866 to 164237877 11 - TSS region transcription start site region 27393
Tssr27394 2 164237903 to 164237911 8 - TSS region transcription start site region 27394
Tssr27395 2 164238242 to 164238248 6 - TSS region transcription start site region 27395
Tssr27396 2 164238258 to 164238273 15 - TSS region transcription start site region 27396
Tssr27397 2 164238292 to 164238296 4 - TSS region transcription start site region 27397
Tssr27398 2 164238338 to 164238346 8 - TSS region transcription start site region 27398
Tssr27399 2 164238437 to 164238443 6 - TSS region transcription start site region 27399