Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:16413678-17518726

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxdc2 2 16356304 to 16755839 399535 + protein coding gene plexin domain containing 2
Tssr16329 2 16424517 to 16424522 5 + TSS region transcription start site region 16329
Tssr16330 2 16431735 to 16431752 17 + TSS region transcription start site region 16330
Tssr16331 2 16438293 to 16438319 26 + TSS region transcription start site region 16331
Tssr16332 2 16457336 to 16457347 11 + TSS region transcription start site region 16332
Tssr16333 2 16458859 to 16458908 49 + TSS region transcription start site region 16333
Tssr16334 2 16463844 to 16463856 12 + TSS region transcription start site region 16334
Tssr16335 2 16512152 to 16512164 12 + TSS region transcription start site region 16335
Tssr16336 2 16532052 to 16532079 27 + TSS region transcription start site region 16336
Tssr16337 2 16548737 to 16548755 18 + TSS region transcription start site region 16337
Tssr16338 2 16548928 to 16548953 25 + TSS region transcription start site region 16338
Tssr16339 2 16565402 to 16565409 7 + TSS region transcription start site region 16339
Tssr16340 2 16568520 to 16568550 30 + TSS region transcription start site region 16340
Tssr22741 2 16571860 to 16571870 10 - TSS region transcription start site region 22741
Tssr16341 2 16650178 to 16650190 12 + TSS region transcription start site region 16341
Tssr16342 2 16657415 to 16657420 5 + TSS region transcription start site region 16342
Tssr16343 2 16660820 to 16660837 17 + TSS region transcription start site region 16343
Tssr16344 2 16675231 to 16675266 35 + TSS region transcription start site region 16344
Tssr16345 2 16675302 to 16675306 4 + TSS region transcription start site region 16345
9930032E11Rik 2 16692247 to 16695625 3378 unclassified gene RIKEN cDNA 9930032E11 gene
Tssr22742 2 16712119 to 16712159 40 - TSS region transcription start site region 22742
Tssr16346 2 16729283 to 16729295 12 + TSS region transcription start site region 16346
Tssr16347 2 16751197 to 16751208 11 + TSS region transcription start site region 16347
Tssr16348 2 16751278 to 16751296 18 + TSS region transcription start site region 16348
Tssr16349 2 16751385 to 16751404 19 + TSS region transcription start site region 16349
Tssr16350 2 16755317 to 16755329 12 + TSS region transcription start site region 16350
Tssr16351 2 16758938 to 16758973 35 + TSS region transcription start site region 16351
Tssr16352 2 16776654 to 16776657 3 + TSS region transcription start site region 16352
4930515L03Rik 2 16918678 to 17013726 95048 - lncRNA gene RIKEN cDNA 4930515L03 gene
Gm24933 2 16959909 to 16960018 109 - miRNA gene predicted gene, 24933
Gm13326 2 16978821 to 16979831 1010 - pseudogene predicted gene 13326
2900073N21Rik 2 17017681 to 17018645 964 unclassified gene RIKEN cDNA 2900073N21 gene
Gm33002 2 17061614 to 17166869 105255 - lncRNA gene predicted gene, 33002
Gm13325 2 17169225 to 17170030 805 + pseudogene predicted gene 13325
Gm13322 2 17181743 to 17185487 3744 - lincRNA gene predicted gene 13322
Tssr22743 2 17185478 to 17185492 14 - TSS region transcription start site region 22743
Tssr22744 2 17202088 to 17202092 4 - TSS region transcription start site region 22744
D2Mit267 2 17202994 to 17203123 129 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 267
Nebl 2 17343909 to 17731464 387555 - protein coding gene nebulette
Tssr22745 2 17365307 to 17365321 14 - TSS region transcription start site region 22745
A430023P06Rik 2 17365431 to 17367972 2541 unclassified gene RIKEN cDNA A430023P06 gene
Tssr22746 2 17368615 to 17368651 36 - TSS region transcription start site region 22746
Tssr22747 2 17390860 to 17390871 11 - TSS region transcription start site region 22747
Tssr22748 2 17390874 to 17390884 10 - TSS region transcription start site region 22748
Tssr22749 2 17390890 to 17390899 9 - TSS region transcription start site region 22749
Tssr22750 2 17390910 to 17390943 33 - TSS region transcription start site region 22750
Tssr22751 2 17390953 to 17391042 89 - TSS region transcription start site region 22751
Tssr22752 2 17391094 to 17391105 11 - TSS region transcription start site region 22752
Tssr22753 2 17411156 to 17411161 5 - TSS region transcription start site region 22753
Tssr22754 2 17460583 to 17460594 11 - TSS region transcription start site region 22754
Tssr22755 2 17460600 to 17460609 9 - TSS region transcription start site region 22755
Tssr22756 2 17460610 to 17460635 25 - TSS region transcription start site region 22756