Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:16401654-17151657

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxdc2 2 16356304 to 16755839 399535 + protein coding gene plexin domain containing 2
Tssr16320 2 16401652 to 16401663 11 + TSS region transcription start site region 16320
Tssr16321 2 16401678 to 16401706 28 + TSS region transcription start site region 16321
Tssr16322 2 16401725 to 16401779 54 + TSS region transcription start site region 16322
Tssr16323 2 16402026 to 16402040 14 + TSS region transcription start site region 16323
Tssr16324 2 16404158 to 16404162 4 + TSS region transcription start site region 16324
Tssr16325 2 16408528 to 16408540 12 + TSS region transcription start site region 16325
Tssr16326 2 16408547 to 16408564 17 + TSS region transcription start site region 16326
Tssr16327 2 16408691 to 16408715 24 + TSS region transcription start site region 16327
Tssr16328 2 16410550 to 16410566 16 + TSS region transcription start site region 16328
Tssr16329 2 16424517 to 16424522 5 + TSS region transcription start site region 16329
Tssr16330 2 16431735 to 16431752 17 + TSS region transcription start site region 16330
Tssr16331 2 16438293 to 16438319 26 + TSS region transcription start site region 16331
Tssr16332 2 16457336 to 16457347 11 + TSS region transcription start site region 16332
Tssr16333 2 16458859 to 16458908 49 + TSS region transcription start site region 16333
Tssr16334 2 16463844 to 16463856 12 + TSS region transcription start site region 16334
Tssr16335 2 16512152 to 16512164 12 + TSS region transcription start site region 16335
Tssr16336 2 16532052 to 16532079 27 + TSS region transcription start site region 16336
Tssr16337 2 16548737 to 16548755 18 + TSS region transcription start site region 16337
Tssr16338 2 16548928 to 16548953 25 + TSS region transcription start site region 16338
Tssr16339 2 16565402 to 16565409 7 + TSS region transcription start site region 16339
Tssr16340 2 16568520 to 16568550 30 + TSS region transcription start site region 16340
Tssr22741 2 16571860 to 16571870 10 - TSS region transcription start site region 22741
Tssr16341 2 16650178 to 16650190 12 + TSS region transcription start site region 16341
Tssr16342 2 16657415 to 16657420 5 + TSS region transcription start site region 16342
Tssr16343 2 16660820 to 16660837 17 + TSS region transcription start site region 16343
Tssr16344 2 16675231 to 16675266 35 + TSS region transcription start site region 16344
Tssr16345 2 16675302 to 16675306 4 + TSS region transcription start site region 16345
9930032E11Rik 2 16692247 to 16695625 3378 unclassified gene RIKEN cDNA 9930032E11 gene
Tssr22742 2 16712119 to 16712159 40 - TSS region transcription start site region 22742
Tssr16346 2 16729283 to 16729295 12 + TSS region transcription start site region 16346
Tssr16347 2 16751197 to 16751208 11 + TSS region transcription start site region 16347
Tssr16348 2 16751278 to 16751296 18 + TSS region transcription start site region 16348
Tssr16349 2 16751385 to 16751404 19 + TSS region transcription start site region 16349
Tssr16350 2 16755317 to 16755329 12 + TSS region transcription start site region 16350
Tssr16351 2 16758938 to 16758973 35 + TSS region transcription start site region 16351
Tssr16352 2 16776654 to 16776657 3 + TSS region transcription start site region 16352
4930515L03Rik 2 16918678 to 17013726 95048 - lncRNA gene RIKEN cDNA 4930515L03 gene
Gm24933 2 16959909 to 16960018 109 - miRNA gene predicted gene, 24933
Gm13326 2 16978821 to 16979831 1010 - pseudogene predicted gene 13326
2900073N21Rik 2 17017681 to 17018645 964 unclassified gene RIKEN cDNA 2900073N21 gene
Gm33002 2 17061614 to 17166869 105255 - lncRNA gene predicted gene, 33002