Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:163439516-163589618

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gdap1l1 2 163438476 to 163455324 16848 + protein coding gene ganglioside-induced differentiation-associated protein 1-like 1
Gm39979 2 163456471 to 163461813 5342 + lncRNA gene predicted gene, 39979
Fitm2 2 163468703 to 163472629 3926 - protein coding gene fat storage-inducing transmembrane protein 2
Cpgi12635 2 163471941 to 163472825 884 CpG island CpG island 12635
Tssr27293 2 163472510 to 163472522 12 - TSS region transcription start site region 27293
2310001K24Rik 2 163472545 to 163473003 458 + antisense lncRNA gene RIKEN cDNA 2310001K24 gene
Tssr27294 2 163472561 to 163472635 74 - TSS region transcription start site region 27294
Tssr27295 2 163472636 to 163472668 32 - TSS region transcription start site region 27295
Cpgi12636 2 163481623 to 163482286 663 CpG island CpG island 12636
Tssr21466 2 163491605 to 163491617 12 + TSS region transcription start site region 21466
Tssr21467 2 163491655 to 163491677 22 + TSS region transcription start site region 21467
Tssr21468 2 163491709 to 163491722 13 + TSS region transcription start site region 21468
R3hdml 2 163492318 to 163502612 10294 + protein coding gene R3H domain containing-like
Hnf4aos 2 163493807 to 163541720 47913 - antisense lncRNA gene hepatic nuclear factor 4 alpha, opposite strand
Hnf4a 2 163506809 to 163572907 66098 + protein coding gene hepatic nuclear factor 4, alpha
Tssr21469 2 163506822 to 163506860 38 + TSS region transcription start site region 21469
Tssr27296 2 163509630 to 163509644 14 - TSS region transcription start site region 27296
Gm25881 2 163514516 to 163514618 102 + snRNA gene predicted gene, 25881
Tssr27297 2 163517615 to 163517622 7 - TSS region transcription start site region 27297
Cpgi12637 2 163535001 to 163535365 364 CpG island CpG island 12637
Tssr27298 2 163541715 to 163541728 13 - TSS region transcription start site region 27298
Tssr21470 2 163547133 to 163547146 13 + TSS region transcription start site region 21470
Tssr21471 2 163547148 to 163547168 20 + TSS region transcription start site region 21471
Tssr734 2 163547253 to 163547289 36 + TSS region transcription start site region 734
Tssr21472 2 163547338 to 163547350 12 + TSS region transcription start site region 21472
Tssr21473 2 163551622 to 163551634 12 + TSS region transcription start site region 21473
Tssr21474 2 163570286 to 163570314 28 + TSS region transcription start site region 21474
Gm18590 2 163585220 to 163585752 532 + pseudogene predicted gene, 18590
Tssr27299 2 163587587 to 163587599 12 - TSS region transcription start site region 27299