Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:162999167-163119193

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgk2 2 162987330 to 163014127 26797 + protein coding gene serum/glucocorticoid regulated kinase 2
Tssr21429 2 163007460 to 163007463 3 + TSS region transcription start site region 21429
Cpgi12624 2 163016940 to 163017756 816 CpG island CpG island 12624
Ift52 2 163017354 to 163046141 28787 + protein coding gene intraflagellar transport 52
Tssr21430 2 163017450 to 163017513 63 + TSS region transcription start site region 21430
Tssr27276 2 163031427 to 163031438 11 - TSS region transcription start site region 27276
Cpgi12625 2 163048117 to 163048308 191 CpG island CpG island 12625
Cpgi12626 2 163054252 to 163055404 1152 CpG island CpG island 12626
Tssr27277 2 163054407 to 163054420 13 - TSS region transcription start site region 27277
Tssr27278 2 163054443 to 163054454 11 - TSS region transcription start site region 27278
Tssr21431 2 163054570 to 163054583 13 + TSS region transcription start site region 21431
Tssr21432 2 163054591 to 163054649 58 + TSS region transcription start site region 21432
Tssr21433 2 163054651 to 163054677 26 + TSS region transcription start site region 21433
Tssr21434 2 163054682 to 163054693 11 + TSS region transcription start site region 21434
Mybl2 2 163054687 to 163084688 30001 + protein coding gene myeloblastosis oncogene-like 2
Tssr21435 2 163059167 to 163059193 26 + TSS region transcription start site region 21435
Tssr21436 2 163059208 to 163059219 11 + TSS region transcription start site region 21436
Tssr21437 2 163059396 to 163059418 22 + TSS region transcription start site region 21437
D2Mit290 2 163060474 to 163060662 188 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 290
D2Mit290.4 2 163060619 to 163060768 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 290.4
Tssr21438 2 163062357 to 163062372 15 + TSS region transcription start site region 21438
Tssr21439 2 163062435 to 163062455 20 + TSS region transcription start site region 21439
Tssr21440 2 163063219 to 163063221 2 + TSS region transcription start site region 21440
Mir7003 2 163068090 to 163068155 65 + miRNA gene microRNA 7003
Tssr21441 2 163068213 to 163068222 9 + TSS region transcription start site region 21441
Tssr21442 2 163074631 to 163074654 23 + TSS region transcription start site region 21442
Gtsf1l 2 163087034 to 163087855 821 - protein coding gene gametocyte specific factor 1-like
Tssr27279 2 163087770 to 163087779 9 - TSS region transcription start site region 27279
Tssr27280 2 163087789 to 163087801 12 - TSS region transcription start site region 27280
Tssr27281 2 163087814 to 163087834 20 - TSS region transcription start site region 27281
Tssr27282 2 163089594 to 163089617 23 - TSS region transcription start site region 27282
Gm22174 2 163092899 to 163093023 124 + miRNA gene predicted gene, 22174
Cpgi12627 2 163104553 to 163104777 224 CpG island CpG island 12627