Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:162881528-162987121

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scfq1 2 151799021 to 162895154 11096133 QTL subcutaneous fat pad weight QTL 1
Epfq1 2 151799021 to 162895154 11096133 QTL epididymal fat pad weight QTL 1
Tailq2 2 151799021 to 162895154 11096133 QTL tail length QTL 2
Cpgi12618 2 162888431 to 162888699 268 CpG island CpG island 12618
Epfq2 2 162895006 to 178800659 15905653 QTL epididymal fat pad weight QTL 2
D2Mit49 2 162895006 to 162895154 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 49
Tailq4 2 162895006 to 178800659 15905653 QTL tail length QTL 4
Gm11451 2 162898894 to 162899523 629 - pseudogene predicted gene 11451
Cpgi12619 2 162899361 to 162899603 242 CpG island CpG island 12619
Gm11452 2 162907924 to 162908613 689 + pseudogene predicted gene 11452
Cpgi12620 2 162908307 to 162908595 288 CpG island CpG island 12620
Gm39978 2 162916670 to 162917894 1224 - lncRNA gene predicted gene, 39978
Cisd3b 2 162919088 to 162923267 4179 - protein coding gene CDGSH iron sulfur domain 3B
Tssr27274 2 162924658 to 162924662 4 - TSS region transcription start site region 27274
Cpgi12621 2 162930913 to 162932454 1541 CpG island CpG island 12621
1700007A02Rik 2 162931266 to 162931443 177 unclassified gene RIKEN cDNA 1700007A02 gene
Tssr21420 2 162931520 to 162931536 16 + TSS region transcription start site region 21420
Srsf6 2 162931528 to 162937121 5593 + protein coding gene serine/arginine-rich splicing factor 6
Tssr27275 2 162932427 to 162932462 35 - TSS region transcription start site region 27275
Cpgi12622 2 162943284 to 162943776 492 CpG island CpG island 12622
L3mbtl1 2 162943472 to 162974522 31050 + protein coding gene L3MBTL1 histone methyl-lysine binding protein
Tssr21421 2 162943484 to 162943516 32 + TSS region transcription start site region 21421
Cpgi12623 2 162947780 to 162948344 564 CpG island CpG island 12623
Gm11453 2 162982255 to 162983261 1006 - pseudogene predicted gene 11453