Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:162692079-163043194

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tailq2 2 151799021 to 162895154 11096133 QTL tail length QTL 2
Scfq1 2 151799021 to 162895154 11096133 QTL subcutaneous fat pad weight QTL 1
Epfq1 2 151799021 to 162895154 11096133 QTL epididymal fat pad weight QTL 1
Gm22936 2 162757309 to 162757434 125 + snoRNA gene predicted gene, 22936
Gm11450 2 162805590 to 162805922 332 + pseudogene predicted gene 11450
Gm24478 2 162816311 to 162816468 157 - snRNA gene predicted gene, 24478
Gm14255 2 162867079 to 162868194 1115 - lincRNA gene predicted gene 14255
Cpgi12618 2 162888431 to 162888699 268 CpG island CpG island 12618
Tailq4 2 162895006 to 178800659 15905653 QTL tail length QTL 4
D2Mit49 2 162895006 to 162895154 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 49
Epfq2 2 162895006 to 178800659 15905653 QTL epididymal fat pad weight QTL 2
Gm11451 2 162898894 to 162899523 629 - pseudogene predicted gene 11451
Cpgi12619 2 162899361 to 162899603 242 CpG island CpG island 12619
Gm11452 2 162907924 to 162908613 689 + pseudogene predicted gene 11452
Cpgi12620 2 162908307 to 162908595 288 CpG island CpG island 12620
Gm39978 2 162916670 to 162917894 1224 - lncRNA gene predicted gene, 39978
Cisd3b 2 162919088 to 162923267 4179 - protein coding gene CDGSH iron sulfur domain 3B
Tssr27274 2 162924658 to 162924662 4 - TSS region transcription start site region 27274
Cpgi12621 2 162930913 to 162932454 1541 CpG island CpG island 12621
1700007A02Rik 2 162931266 to 162931443 177 unclassified gene RIKEN cDNA 1700007A02 gene
Tssr21420 2 162931520 to 162931536 16 + TSS region transcription start site region 21420
Srsf6 2 162931528 to 162937121 5593 + protein coding gene serine/arginine-rich splicing factor 6
Tssr27275 2 162932427 to 162932462 35 - TSS region transcription start site region 27275
Cpgi12622 2 162943284 to 162943776 492 CpG island CpG island 12622
L3mbtl1 2 162943472 to 162974522 31050 + protein coding gene L3MBTL1 histone methyl-lysine binding protein
Tssr21421 2 162943484 to 162943516 32 + TSS region transcription start site region 21421
Cpgi12623 2 162947780 to 162948344 564 CpG island CpG island 12623
Gm11453 2 162982255 to 162983261 1006 - pseudogene predicted gene 11453
Sgk2 2 162987330 to 163014127 26797 + protein coding gene serum/glucocorticoid regulated kinase 2
Tssr21422 2 162987427 to 162987436 9 + TSS region transcription start site region 21422
Tssr21423 2 162987442 to 162987449 7 + TSS region transcription start site region 21423
Tssr21424 2 162987474 to 162987486 12 + TSS region transcription start site region 21424
Tssr21425 2 162987504 to 162987509 5 + TSS region transcription start site region 21425
Tssr21426 2 162987519 to 162987537 18 + TSS region transcription start site region 21426
Tssr21427 2 162987547 to 162987560 13 + TSS region transcription start site region 21427
Tssr21428 2 162991587 to 162991598 11 + TSS region transcription start site region 21428
Tssr21429 2 163007460 to 163007463 3 + TSS region transcription start site region 21429
Cpgi12624 2 163016940 to 163017756 816 CpG island CpG island 12624
Ift52 2 163017354 to 163046141 28787 + protein coding gene intraflagellar transport 52
Tssr21430 2 163017450 to 163017513 63 + TSS region transcription start site region 21430
Tssr27276 2 163031427 to 163031438 11 - TSS region transcription start site region 27276