Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:162454609-162834629

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptprt 2 161521990 to 162661147 1139157 - protein coding gene protein tyrosine phosphatase, receptor type, T
Cpgi12616 2 162485599 to 162485943 344 CpG island CpG island 12616
Gm46774 2 162491060 to 162497812 6752 - lncRNA gene predicted gene, 46774
Tssr27271 2 162644609 to 162644629 20 - TSS region transcription start site region 27271
D2Mit170 2 162654924 to 162655060 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 170
Cpgi12617 2 162660159 to 162661693 1534 CpG island CpG island 12617
Tssr27272 2 162661049 to 162661058 9 - TSS region transcription start site region 27272
Tssr27273 2 162661075 to 162661090 15 - TSS region transcription start site region 27273
9430021M05Rik 2 162661163 to 162667109 5946 + lncRNA gene RIKEN cDNA 9430021M05 gene
Tssr21417 2 162661192 to 162661239 47 + TSS region transcription start site region 21417
Tssr21418 2 162661244 to 162661260 16 + TSS region transcription start site region 21418
Tssr21419 2 162661304 to 162661320 16 + TSS region transcription start site region 21419
Hdlq19 2 162676855 to 162677006 151 QTL HDL QTL 19
D2Mit50 2 162676855 to 162677006 151 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 50
Mobq5 2 162677006 to 65439402 -97237604 QTL multigenic obesity QTL 5
Gm14246 2 162679455 to 162680529 1074 + lincRNA gene predicted gene 14246
Gm22936 2 162757309 to 162757434 125 + snoRNA gene predicted gene, 22936
Gm11450 2 162805590 to 162805922 332 + pseudogene predicted gene 11450
Gm24478 2 162816311 to 162816468 157 - snRNA gene predicted gene, 24478