MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:160860698-160900726

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zhx3	2	160770447 to 160872990	102543	-	protein coding gene	zinc fingers and homeoboxes 3
Gm16751	2	160840836 to 160888028	47192	-	antisense lncRNA gene	predicted gene, 16751
Cpgi12611	2	160871998 to 160873397	1399		CpG island	CpG island 12611
Tssr27252	2	160872552 to 160872622	70	-	TSS region	transcription start site region 27252
Tssr27253	2	160872932 to 160872943	11	-	TSS region	transcription start site region 27253
Tssr27254	2	160872945 to 160872972	27	-	TSS region	transcription start site region 27254
Tssr27255	2	160872985 to 160873009	24	-	TSS region	transcription start site region 27255
Gm35129	2	160873152 to 160879549	6397	+	lncRNA gene	predicted gene, 35129
Tssr27256	2	160874398 to 160874424	26	-	TSS region	transcription start site region 27256
Tssr21408	2	160880642 to 160880650	8	+	TSS region	transcription start site region 21408
Lpin3	2	160880670 to 160906000	25330	+	protein coding gene	lipin 3
Tssr21409	2	160880698 to 160880726	28	+	TSS region	transcription start site region 21409
Tssr21410	2	160880728 to 160880747	19	+	TSS region	transcription start site region 21410
Cpgi12612	2	160887448 to 160888277	829		CpG island	CpG island 12612
Tssr27257	2	160888035 to 160888043	8	-	TSS region	transcription start site region 27257
Tssr21411	2	160888101 to 160888113	12	+	TSS region	transcription start site region 21411
Tssr21412	2	160888156 to 160888199	43	+	TSS region	transcription start site region 21412
Tssr21413	2	160891973 to 160891999	26	+	TSS region	transcription start site region 21413