Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ltpr2 | 2 | 64105065 | QTL | Leishmania tropica response 2 | ||
Pwgrq2 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 2 | ||
Pwbwq1 | 2 | 42010473 | QTL | pre-weaning body weight QTL 1 | ||
Pwgrq1 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 1 | ||
Pwbwq5 | 2 | 42010473 | QTL | post-weaning body weight QTL 5 | ||
Bsbob | 2 | 21891574 | QTL | BSB obesity | ||
Gnf1 | 2 | 25344479 | QTL | growth and fatness 1 | ||
Wg2d | 2 | 16529563 | QTL | weight gain in high growth mice 2d | ||
Hylaq2 | 2 | 12478205 | QTL | Hyperlocomotor activity related QTL 2 | ||
Tailq2 | 2 | 11096133 | QTL | tail length QTL 2 | ||
Scfq1 | 2 | 11096133 | QTL | subcutaneous fat pad weight QTL 1 | ||
Epfq1 | 2 | 11096133 | QTL | epididymal fat pad weight QTL 1 | ||
Gnf2 | 2 | 9497864 | QTL | growth and fatness 2 | ||
Gnf3 | 2 | 16418703 | QTL | growth and fatness 3 | ||
D2Mit196 | 2 | 143 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 196 | ||
D2Dcr114 | 2 | 117 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 114 | ||
D2Mit453 | 2 | 113 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 453 | ||
Gm14221 | 2 | 13135 | - | lincRNA gene | predicted gene 14221 | |
Gm14222 | 2 | 1834 | + | sense intronic lncRNA gene | predicted gene 14222 | |
Tssr21387 | 2 | 4 | + | TSS region | transcription start site region 21387 | |
Tssr27242 | 2 | 35 | - | TSS region | transcription start site region 27242 | |
Gm23968 | 2 | 124 | + | miRNA gene | predicted gene, 23968 | |
Cpgi12609 | 2 | 1538 | CpG island | CpG island 12609 | ||
Tssr21388 | 2 | 15 | + | TSS region | transcription start site region 21388 | |
Top1 | 2 | 76867 | + | protein coding gene | topoisomerase (DNA) I | |
Tssr21389 | 2 | 22 | + | TSS region | transcription start site region 21389 | |
Tssr21390 | 2 | 11 | + | TSS region | transcription start site region 21390 | |
Tssr21391 | 2 | 15 | + | TSS region | transcription start site region 21391 | |
Tssr21392 | 2 | 19 | + | TSS region | transcription start site region 21392 | |
Tssr27243 | 2 | 6 | - | TSS region | transcription start site region 27243 | |
Tssr27244 | 2 | 5 | - | TSS region | transcription start site region 27244 | |
Tssr27245 | 2 | 16 | - | TSS region | transcription start site region 27245 | |
D2Ertd122e | 2 | 235 | DNA segment | DNA segment, Chr 2, ERATO Doi 122, expressed | ||
Tssr21393 | 2 | 6 | + | TSS region | transcription start site region 21393 | |
Tssr21394 | 2 | 53 | + | TSS region | transcription start site region 21394 | |
Tssr21395 | 2 | 8 | + | TSS region | transcription start site region 21395 | |
D2Mit143 | 2 | 98 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 143 | ||
Tssr27246 | 2 | 58 | - | TSS region | transcription start site region 27246 | |
Tssr21396 | 2 | 30 | + | TSS region | transcription start site region 21396 | |
Tssr21397 | 2 | 27 | + | TSS region | transcription start site region 21397 | |
Tssr21398 | 2 | 4 | + | TSS region | transcription start site region 21398 | |
Cpgi12610 | 2 | 1818 | CpG island | CpG island 12610 | ||
Tssr21399 | 2 | 42 | + | TSS region | transcription start site region 21399 | |
Plcg1 | 2 | 44450 | + | protein coding gene | phospholipase C, gamma 1 | |
Tssr21400 | 2 | 76 | + | TSS region | transcription start site region 21400 | |
Tssr21401 | 2 | 20 | + | TSS region | transcription start site region 21401 | |
Tssr21402 | 2 | 3 | + | TSS region | transcription start site region 21402 | |
Tssr21403 | 2 | 7 | + | TSS region | transcription start site region 21403 | |
Gm27206 | 2 | 7982 | - | antisense lncRNA gene | predicted gene 27206 | |
Tssr21404 | 2 | 12 | + | TSS region | transcription start site region 21404 | |
Tssr21405 | 2 | 15 | + | TSS region | transcription start site region 21405 | |
Tssr21406 | 2 | 10 | + | TSS region | transcription start site region 21406 | |
Pwbwq2 | 2 | 9183637 | QTL | pre-weaning body weight QTL 2 | ||
Pwgrq3 | 2 | 9183637 | QTL | pre-weaning growth rate QTL 3 | ||
Tssr27247 | 2 | 3 | - | TSS region | transcription start site region 27247 | |
Zhx3 | 2 | 102543 | - | protein coding gene | zinc fingers and homeoboxes 3 | |
Tssr21407 | 2 | 10 | + | TSS region | transcription start site region 21407 | |
Tssr27248 | 2 | 5 | - | TSS region | transcription start site region 27248 | |
Gm16751 | 2 | 47192 | - | antisense lncRNA gene | predicted gene, 16751 | |
Gm11447 | 2 | 857 | + | pseudogene | predicted gene 11447 | |
Tssr27249 | 2 | 29 | - | TSS region | transcription start site region 27249 | |
Tssr27250 | 2 | 7 | - | TSS region | transcription start site region 27250 | |
Tssr27251 | 2 | 4 | - | TSS region | transcription start site region 27251 | |
Cpgi12611 | 2 | 1399 | CpG island | CpG island 12611 | ||
Tssr27252 | 2 | 70 | - | TSS region | transcription start site region 27252 | |
Tssr27253 | 2 | 11 | - | TSS region | transcription start site region 27253 | |
Tssr27254 | 2 | 27 | - | TSS region | transcription start site region 27254 | |
Tssr27255 | 2 | 24 | - | TSS region | transcription start site region 27255 | |
Gm35129 | 2 | 6397 | + | lncRNA gene | predicted gene, 35129 | |
Tssr27256 | 2 | 26 | - | TSS region | transcription start site region 27256 | |
Tssr21408 | 2 | 8 | + | TSS region | transcription start site region 21408 | |
Lpin3 | 2 | 25330 | + | protein coding gene | lipin 3 | |
Tssr21409 | 2 | 28 | + | TSS region | transcription start site region 21409 | |
Tssr21410 | 2 | 19 | + | TSS region | transcription start site region 21410 | |
Cpgi12612 | 2 | 829 | CpG island | CpG island 12612 | ||
Tssr27257 | 2 | 8 | - | TSS region | transcription start site region 27257 | |
Tssr21411 | 2 | 12 | + | TSS region | transcription start site region 21411 | |
Tssr21412 | 2 | 43 | + | TSS region | transcription start site region 21412 | |
Tssr21413 | 2 | 26 | + | TSS region | transcription start site region 21413 | |
Emilin3 | 2 | 5891 | - | protein coding gene | elastin microfibril interfacer 3 | |
Cpgi12613 | 2 | 1365 | CpG island | CpG island 12613 | ||
Tssr27258 | 2 | 52 | - | TSS region | transcription start site region 27258 | |
Tssr27259 | 2 | 6 | - | TSS region | transcription start site region 27259 | |
Gm35181 | 2 | 13085 | + | lncRNA gene | predicted gene, 35181 | |
Gm14228 | 2 | 1107 | - | lincRNA gene | predicted gene 14228 | |
Chd6 | 2 | 162097 | - | protein coding gene | chromodomain helicase DNA binding protein 6 | |
Tssr27260 | 2 | 4 | - | TSS region | transcription start site region 27260 | |
Tssr27261 | 2 | 9 | - | TSS region | transcription start site region 27261 | |
Tssr27262 | 2 | 11 | - | TSS region | transcription start site region 27262 | |
Tssr27263 | 2 | 11 | - | TSS region | transcription start site region 27263 | |
Tssr27264 | 2 | 12 | - | TSS region | transcription start site region 27264 | |
Tssr27265 | 2 | 27 | - | TSS region | transcription start site region 27265 | |
Tssr27266 | 2 | 2 | - | TSS region | transcription start site region 27266 | |
Gm25561 | 2 | 124 | + | snoRNA gene | predicted gene, 25561 | |
Tssr21414 | 2 | 13 | + | TSS region | transcription start site region 21414 | |
Cpgi12614 | 2 | 1688 | CpG island | CpG island 12614 | ||
Tssr27267 | 2 | 10 | - | TSS region | transcription start site region 27267 | |
Tssr27268 | 2 | 55 | - | TSS region | transcription start site region 27268 | |
Tssr27269 | 2 | 5 | - | TSS region | transcription start site region 27269 | |
Gm45447 | 2 | 5447 | + | antisense lncRNA gene | predicted gene 45447 | |
D2Mit509 | 2 | 149 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology-509 | ||
Gm14243 | 2 | 37513 | + | lincRNA gene | predicted gene 14243 | |
Gm14242 | 2 | 591 | - | lincRNA gene | predicted gene 14242 | |
Gm5270 | 2 | 1001 | - | pseudogene | predicted gene 5270 | |
Gm11448 | 2 | 449 | + | pseudogene | predicted gene 11448 | |
Gm14241 | 2 | 939 | + | lincRNA gene | predicted gene 14241 | |
Cpgi12615 | 2 | 181 | CpG island | CpG island 12615 | ||
Tssr731 | 2 | 4 | + | TSS region | transcription start site region 731 | |
Gm35374 | 2 | 21437 | + | lncRNA gene | predicted gene, 35374 | |
Gm11449 | 2 | 475 | - | pseudogene | predicted gene 11449 | |
Gm29229 | 2 | 322 | - | unclassified non-coding RNA gene | predicted gene 29229 | |
Tssr27270 | 2 | 4 | - | TSS region | transcription start site region 27270 | |
Ptprt | 2 | 1139157 | - | protein coding gene | protein tyrosine phosphatase, receptor type, T | |
Tssr21415 | 2 | 2 | + | TSS region | transcription start site region 21415 | |
D2Mit197 | 2 | 146 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 197 | ||
D2Mit142 | 2 | 117 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 142 | ||
D2Mit497 | 2 | 248 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 497 | ||
Tssr21416 | 2 | 1 | + | TSS region | transcription start site region 21416 | |
D2Mit310 | 2 | 137 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 310 | ||
Tssr732 | 2 | 1 | + | TSS region | transcription start site region 732 | |
D2Mit412 | 2 | 124 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 412 | ||
D2Mit263.3 | 2 | 111 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 263.3 | ||
D2Mit263 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 263 | ||
Tbbmd3 | 2 | 136 | QTL | total body bone mineral density 3 | ||
D2Mit452.2 | 2 | 142 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 452.2 | ||
D2Mit452 | 2 | 122 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 452 | ||
Aod4 | 2 | 122 | QTL | autoimmune ovarian dysgenesis 4 | ||
Ptprtos | 2 | 3132 | + | antisense lncRNA gene | protein tyrosine phosphatase, receptor type T, opposite strand | |
Tssr733 | 2 | 2 | + | TSS region | transcription start site region 733 | |
D2Dcr124 | 2 | 97 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 124 | ||
Cpgi12616 | 2 | 344 | CpG island | CpG island 12616 | ||
Gm46774 | 2 | 6752 | - | lncRNA gene | predicted gene, 46774 | |
Tssr27271 | 2 | 20 | - | TSS region | transcription start site region 27271 | |
D2Mit170 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 170 | ||
Cpgi12617 | 2 | 1534 | CpG island | CpG island 12617 | ||
Tssr27272 | 2 | 9 | - | TSS region | transcription start site region 27272 | |
Tssr27273 | 2 | 15 | - | TSS region | transcription start site region 27273 | |
9430021M05Rik | 2 | 5946 | + | lncRNA gene | RIKEN cDNA 9430021M05 gene | |
Tssr21417 | 2 | 47 | + | TSS region | transcription start site region 21417 | |
Tssr21418 | 2 | 16 | + | TSS region | transcription start site region 21418 | |
Tssr21419 | 2 | 16 | + | TSS region | transcription start site region 21419 | |
Hdlq19 | 2 | 151 | QTL | HDL QTL 19 | ||
D2Mit50 | 2 | 151 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 50 | ||
Mobq5 | 2 | -97237604 | QTL | multigenic obesity QTL 5 | ||
Gm14246 | 2 | 1074 | + | lincRNA gene | predicted gene 14246 | |
Gm22936 | 2 | 125 | + | snoRNA gene | predicted gene, 22936 | |
Gm11450 | 2 | 332 | + | pseudogene | predicted gene 11450 | |
Gm24478 | 2 | 157 | - | snRNA gene | predicted gene, 24478 | |
Gm14255 | 2 | 1115 | - | lincRNA gene | predicted gene 14255 | |
Cpgi12618 | 2 | 268 | CpG island | CpG island 12618 | ||
Epfq2 | 2 | 15905653 | QTL | epididymal fat pad weight QTL 2 | ||
D2Mit49 | 2 | 148 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 49 | ||
Tailq4 | 2 | 15905653 | QTL | tail length QTL 4 | ||
Gm11451 | 2 | 629 | - | pseudogene | predicted gene 11451 | |
Cpgi12619 | 2 | 242 | CpG island | CpG island 12619 | ||
Gm11452 | 2 | 689 | + | pseudogene | predicted gene 11452 | |
Cpgi12620 | 2 | 288 | CpG island | CpG island 12620 | ||
Gm39978 | 2 | 1224 | - | lncRNA gene | predicted gene, 39978 | |
Cisd3b | 2 | 4179 | - | protein coding gene | CDGSH iron sulfur domain 3B | |
Tssr27274 | 2 | 4 | - | TSS region | transcription start site region 27274 | |
Cpgi12621 | 2 | 1541 | CpG island | CpG island 12621 | ||
1700007A02Rik | 2 | 177 | unclassified gene | RIKEN cDNA 1700007A02 gene | ||
Tssr21420 | 2 | 16 | + | TSS region | transcription start site region 21420 | |
Srsf6 | 2 | 5593 | + | protein coding gene | serine/arginine-rich splicing factor 6 | |
Tssr27275 | 2 | 35 | - | TSS region | transcription start site region 27275 | |
Cpgi12622 | 2 | 492 | CpG island | CpG island 12622 | ||
L3mbtl1 | 2 | 31050 | + | protein coding gene | L3MBTL1 histone methyl-lysine binding protein | |
Tssr21421 | 2 | 32 | + | TSS region | transcription start site region 21421 | |
Cpgi12623 | 2 | 564 | CpG island | CpG island 12623 | ||
Gm11453 | 2 | 1006 | - | pseudogene | predicted gene 11453 | |
Sgk2 | 2 | 26797 | + | protein coding gene | serum/glucocorticoid regulated kinase 2 | |
Tssr21422 | 2 | 9 | + | TSS region | transcription start site region 21422 | |
Tssr21423 | 2 | 7 | + | TSS region | transcription start site region 21423 | |
Tssr21424 | 2 | 12 | + | TSS region | transcription start site region 21424 | |
Tssr21425 | 2 | 5 | + | TSS region | transcription start site region 21425 | |
Tssr21426 | 2 | 18 | + | TSS region | transcription start site region 21426 | |
Tssr21427 | 2 | 13 | + | TSS region | transcription start site region 21427 | |
Tssr21428 | 2 | 11 | + | TSS region | transcription start site region 21428 | |
Tssr21429 | 2 | 3 | + | TSS region | transcription start site region 21429 | |
Cpgi12624 | 2 | 816 | CpG island | CpG island 12624 | ||
Ift52 | 2 | 28787 | + | protein coding gene | intraflagellar transport 52 | |
Tssr21430 | 2 | 63 | + | TSS region | transcription start site region 21430 | |
Tssr27276 | 2 | 11 | - | TSS region | transcription start site region 27276 | |
Cpgi12625 | 2 | 191 | CpG island | CpG island 12625 | ||
Cpgi12626 | 2 | 1152 | CpG island | CpG island 12626 | ||
Tssr27277 | 2 | 13 | - | TSS region | transcription start site region 27277 | |
Tssr27278 | 2 | 11 | - | TSS region | transcription start site region 27278 | |
Tssr21431 | 2 | 13 | + | TSS region | transcription start site region 21431 | |
Tssr21432 | 2 | 58 | + | TSS region | transcription start site region 21432 | |
Tssr21433 | 2 | 26 | + | TSS region | transcription start site region 21433 | |
Tssr21434 | 2 | 11 | + | TSS region | transcription start site region 21434 | |
Mybl2 | 2 | 30001 | + | protein coding gene | myeloblastosis oncogene-like 2 | |
Tssr21435 | 2 | 26 | + | TSS region | transcription start site region 21435 | |
Tssr21436 | 2 | 11 | + | TSS region | transcription start site region 21436 | |
Tssr21437 | 2 | 22 | + | TSS region | transcription start site region 21437 | |
D2Mit290 | 2 | 188 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 290 | ||
D2Mit290.4 | 2 | 149 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 290.4 | ||
Tssr21438 | 2 | 15 | + | TSS region | transcription start site region 21438 | |
Tssr21439 | 2 | 20 | + | TSS region | transcription start site region 21439 | |
Tssr21440 | 2 | 2 | + | TSS region | transcription start site region 21440 |