Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:158635138-158845263

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actr5 2 158624888 to 158639211 14323 + protein coding gene ARP5 actin-related protein 5
Mir3474 2 158638583 to 158638640 57 + miRNA gene microRNA 3474
Tssr728 2 158666398 to 158666439 41 + TSS region transcription start site region 728
Tssr21366 2 158666597 to 158666646 49 + TSS region transcription start site region 21366
Tssr21367 2 158666658 to 158666672 14 + TSS region transcription start site region 21367
Tssr21368 2 158666690 to 158666740 50 + TSS region transcription start site region 21368
Ppp1r16b 2 158666733 to 158766334 99601 + protein coding gene protein phosphatase 1, regulatory subunit 16B
Tssr21369 2 158666743 to 158666752 9 + TSS region transcription start site region 21369
Cpgi12602 2 158667022 to 158668425 1403 CpG island CpG island 12602
Tssr21370 2 158667119 to 158667130 11 + TSS region transcription start site region 21370
Tssr21371 2 158667131 to 158667186 55 + TSS region transcription start site region 21371
Tssr21372 2 158667191 to 158667194 3 + TSS region transcription start site region 21372
Tssr21373 2 158668078 to 158668117 39 + TSS region transcription start site region 21373
Cpgi12603 2 158668558 to 158668825 267 CpG island CpG island 12603
Tssr27235 2 158668753 to 158668759 6 - TSS region transcription start site region 27235
Cpgi12604 2 158695944 to 158696301 357 CpG island CpG island 12604
Tssr21374 2 158700971 to 158700972 1 + TSS region transcription start site region 21374
Tssr21375 2 158723439 to 158723450 11 + TSS region transcription start site region 21375
Tssr21376 2 158723455 to 158723467 12 + TSS region transcription start site region 21376
Gm26141 2 158740138 to 158740263 125 + miRNA gene predicted gene, 26141
Tssr21377 2 158762118 to 158762137 19 + TSS region transcription start site region 21377
Cpgi12605 2 158767740 to 158768707 967 CpG island CpG island 12605
Tssr21378 2 158768083 to 158768099 16 + TSS region transcription start site region 21378
Fam83d 2 158768099 to 158786637 18538 + protein coding gene family with sequence similarity 83, member D
Cpgi12606 2 158794393 to 158795409 1016 CpG island CpG island 12606
Dhx35 2 158794807 to 158858214 63407 + protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 35
Tssr21379 2 158794853 to 158794892 39 + TSS region transcription start site region 21379