Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:158178359-158478369

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34514 2 158179064 to 158179573 509 + lncRNA gene predicted gene, 34514
D630003M21Rik 2 158182533 to 158229222 46689 - protein coding gene RIKEN cDNA D630003M21 gene
1700060C20Rik 2 158192008 to 158195737 3729 + antisense lncRNA gene RIKEN cDNA 1700060C20 gene
Tssr27218 2 158211785 to 158211794 9 - TSS region transcription start site region 27218
Tssr27219 2 158228698 to 158228702 4 - TSS region transcription start site region 27219
Cpgi12590 2 158228785 to 158229764 979 CpG island CpG island 12590
Tssr27220 2 158229215 to 158229240 25 - TSS region transcription start site region 27220
Tssr27221 2 158231169 to 158231173 4 - TSS region transcription start site region 27221
D2Mit225 2 158236417 to 158236560 143 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 225
Nidd2k 2 158236417 to 178800659 20564242 QTL Nidd2 on KK-A
Mir7685 2 158243504 to 158243565 61 - miRNA gene microRNA 7685
Gm34571 2 158247853 to 158258979 11126 - lncRNA gene predicted gene, 34571
Cpgi12591 2 158257886 to 158258182 296 CpG island CpG island 12591
Tssr21302 2 158258065 to 158258109 44 + TSS region transcription start site region 21302
Bpi 2 158258094 to 158284531 26437 + protein coding gene bactericidal permeablility increasing protein
Tssr21303 2 158258203 to 158258209 6 + TSS region transcription start site region 21303
Tssr727 2 158258218 to 158258219 1 + TSS region transcription start site region 727
Tssr21304 2 158258225 to 158258232 7 + TSS region transcription start site region 21304
Tssr21305 2 158258237 to 158258246 9 + TSS region transcription start site region 21305
Tssr21306 2 158258260 to 158258276 16 + TSS region transcription start site region 21306
Tssr27222 2 158258945 to 158258963 18 - TSS region transcription start site region 27222
Tssr21307 2 158262703 to 158262708 5 + TSS region transcription start site region 21307
Cpgi12592 2 158284549 to 158284771 222 CpG island CpG island 12592
Tssr21308 2 158285732 to 158285736 4 + TSS region transcription start site region 21308
Lbp 2 158306493 to 158332852 26359 + protein coding gene lipopolysaccharide binding protein
Tssr21309 2 158306625 to 158306653 28 + TSS region transcription start site region 21309
Tssr21310 2 158313238 to 158313260 22 + TSS region transcription start site region 21310
Tssr21311 2 158313264 to 158313288 24 + TSS region transcription start site region 21311
Tssr21312 2 158320295 to 158320312 17 + TSS region transcription start site region 21312
Tssr27223 2 158320329 to 158320346 17 - TSS region transcription start site region 27223
Tssr21313 2 158324587 to 158324594 7 + TSS region transcription start site region 21313
Tssr21314 2 158328359 to 158328369 10 + TSS region transcription start site region 21314
Snhg17 2 158353700 to 158361522 7822 - lncRNA gene small nucleolar RNA host gene 17
Gm24411 2 158356424 to 158356554 130 - snoRNA gene predicted gene, 24411
Gm26003 2 158358360 to 158358472 112 - snoRNA gene predicted gene, 26003
Gm23925 2 158359798 to 158359929 131 - lincRNA gene predicted gene, 23925
Tssr27224 2 158360567 to 158360610 43 - TSS region transcription start site region 27224
Cpgi12593 2 158361038 to 158361639 601 CpG island CpG island 12593
Tssr27225 2 158361461 to 158361467 6 - TSS region transcription start site region 27225
Tssr27226 2 158361472 to 158361503 31 - TSS region transcription start site region 27226
Tssr27227 2 158361505 to 158361554 49 - TSS region transcription start site region 27227
Cpgi12594 2 158375438 to 158376026 588 CpG island CpG island 12594
Snhg11 2 158375638 to 158386145 10507 + protein coding gene small nucleolar RNA host gene 11
Tssr21315 2 158375703 to 158375721 18 + TSS region transcription start site region 21315
Tssr21316 2 158376255 to 158376295 40 + TSS region transcription start site region 21316
Gm25187 2 158378222 to 158378354 132 + snoRNA gene predicted gene, 25187
Gm25129 2 158379534 to 158379666 132 + snoRNA gene predicted gene, 25129
Tssr21317 2 158381377 to 158381398 21 + TSS region transcription start site region 21317
Tssr21318 2 158382170 to 158382174 4 + TSS region transcription start site region 21318
Tssr21319 2 158382569 to 158382588 19 + TSS region transcription start site region 21319
Tssr21320 2 158382608 to 158382624 16 + TSS region transcription start site region 21320
Tssr21321 2 158382700 to 158382734 34 + TSS region transcription start site region 21321
Tssr21322 2 158382845 to 158382857 12 + TSS region transcription start site region 21322
Tssr21323 2 158382892 to 158382901 9 + TSS region transcription start site region 21323
Tssr21324 2 158382924 to 158382939 15 + TSS region transcription start site region 21324
Tssr21325 2 158382964 to 158382975 11 + TSS region transcription start site region 21325
Tssr21326 2 158382986 to 158382999 13 + TSS region transcription start site region 21326
Tssr21327 2 158383035 to 158383036 1 + TSS region transcription start site region 21327
Tssr21328 2 158383073 to 158383082 9 + TSS region transcription start site region 21328
Tssr21329 2 158383086 to 158383095 9 + TSS region transcription start site region 21329
Tssr21330 2 158383108 to 158383184 76 + TSS region transcription start site region 21330
Tssr27228 2 158383201 to 158383218 17 - TSS region transcription start site region 27228
Tssr21331 2 158383681 to 158383694 13 + TSS region transcription start site region 21331
Tssr21332 2 158383818 to 158383829 11 + TSS region transcription start site region 21332
Tssr21333 2 158383850 to 158383859 9 + TSS region transcription start site region 21333
Tssr21334 2 158384617 to 158384629 12 + TSS region transcription start site region 21334
Tssr21335 2 158384973 to 158384993 20 + TSS region transcription start site region 21335
Tssr21336 2 158385027 to 158385029 2 + TSS region transcription start site region 21336
Tssr21337 2 158385131 to 158385144 13 + TSS region transcription start site region 21337
Tssr21338 2 158385698 to 158385717 19 + TSS region transcription start site region 21338
Gm14201 2 158402727 to 158403015 288 - pseudogene predicted gene 14201
Gm14202 2 158406508 to 158406818 310 - pseudogene predicted gene 14202
Cpgi12595 2 158409329 to 158410688 1359 CpG island CpG island 12595
Tssr21339 2 158409791 to 158409800 9 + TSS region transcription start site region 21339
Tssr21340 2 158409842 to 158409862 20 + TSS region transcription start site region 21340
Ralgapb 2 158409848 to 158499253 89405 + protein coding gene Ral GTPase activating protein, beta subunit (non-catalytic)
Tssr21341 2 158409867 to 158409906 39 + TSS region transcription start site region 21341
Tssr21342 2 158409907 to 158409918 11 + TSS region transcription start site region 21342
Tssr21343 2 158409920 to 158409935 15 + TSS region transcription start site region 21343
Tssr21344 2 158410167 to 158410171 4 + TSS region transcription start site region 21344
3110040K02Rik 2 158411514 to 158411999 485 unclassified gene RIKEN cDNA 3110040K02 gene
Tssr21345 2 158416712 to 158416721 9 + TSS region transcription start site region 21345
Tssr21346 2 158436996 to 158437016 20 + TSS region transcription start site region 21346
Tssr21347 2 158437024 to 158437041 17 + TSS region transcription start site region 21347
Tssr21348 2 158439837 to 158439841 4 + TSS region transcription start site region 21348
Gm14200 2 158468169 to 158468360 191 - pseudogene predicted gene 14200