Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:157116362-158006460

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181 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Samhd1 2 157097533 to 157135265 37732 - protein coding gene SAM domain and HD domain, 1
Tssr27144 2 157119592 to 157119597 5 - TSS region transcription start site region 27144
Tssr27145 2 157120510 to 157120528 18 - TSS region transcription start site region 27145
Tssr27146 2 157121903 to 157121918 15 - TSS region transcription start site region 27146
Tssr27147 2 157121969 to 157121977 8 - TSS region transcription start site region 27147
Tssr27148 2 157123331 to 157123348 17 - TSS region transcription start site region 27148
Tssr27149 2 157123364 to 157123429 65 - TSS region transcription start site region 27149
Tssr27150 2 157124956 to 157124985 29 - TSS region transcription start site region 27150
Tssr27151 2 157125069 to 157125082 13 - TSS region transcription start site region 27151
Tssr27152 2 157125112 to 157125130 18 - TSS region transcription start site region 27152
Tssr27153 2 157129982 to 157129992 10 - TSS region transcription start site region 27153
Tssr27154 2 157130019 to 157130034 15 - TSS region transcription start site region 27154
Tssr27155 2 157130041 to 157130063 22 - TSS region transcription start site region 27155
Tssr27156 2 157130738 to 157130746 8 - TSS region transcription start site region 27156
Tssr27157 2 157131186 to 157131195 9 - TSS region transcription start site region 27157
Tssr27158 2 157133971 to 157133974 3 - TSS region transcription start site region 27158
Tssr27159 2 157134138 to 157134143 5 - TSS region transcription start site region 27159
Tssr21224 2 157134484 to 157134487 3 + TSS region transcription start site region 21224
Cpgi12569 2 157134551 to 157135458 907 CpG island CpG island 12569
Tssr27160 2 157135085 to 157135110 25 - TSS region transcription start site region 27160
Tssr27161 2 157135112 to 157135134 22 - TSS region transcription start site region 27161
Tssr27162 2 157135200 to 157135215 15 - TSS region transcription start site region 27162
Tssr21225 2 157135801 to 157135806 5 + TSS region transcription start site region 21225
Rbl1 2 157145893 to 157204534 58641 - protein coding gene RB transcriptional corepressor like 1
Gm14277 2 157168820 to 157169179 359 + pseudogene predicted gene 14277
Tssr719 2 157201668 to 157201703 35 - TSS region transcription start site region 719
Tssr21226 2 157201782 to 157201785 3 + TSS region transcription start site region 21226
Cpgi12570 2 157203761 to 157205124 1363 CpG island CpG island 12570
Tssr21227 2 157204276 to 157204316 40 + TSS region transcription start site region 21227
2610301H18Rik 2 157204303 to 157206813 2510 protein coding gene RIKEN cDNA 2610301H18 gene
Tssr27163 2 157204444 to 157204462 18 - TSS region transcription start site region 27163
Tssr27164 2 157204483 to 157204542 59 - TSS region transcription start site region 27164
Mroh8 2 157208550 to 157279549 70999 - protein coding gene maestro heat-like repeat family member 8
Cpgi12571 2 157278821 to 157279839 1018 CpG island CpG island 12571
Tssr21228 2 157278998 to 157279025 27 + TSS region transcription start site region 21228
Rpn2 2 157279017 to 157326319 47302 + protein coding gene ribophorin II
Tssr21229 2 157279026 to 157279064 38 + TSS region transcription start site region 21229
Tssr21230 2 157279065 to 157279130 65 + TSS region transcription start site region 21230
Tssr21231 2 157279278 to 157279317 39 + TSS region transcription start site region 21231
Tssr27165 2 157279512 to 157279518 6 - TSS region transcription start site region 27165
Tssr27166 2 157279519 to 157279555 36 - TSS region transcription start site region 27166
Tssr27167 2 157279556 to 157279578 22 - TSS region transcription start site region 27167
Tssr21232 2 157283575 to 157283593 18 + TSS region transcription start site region 21232
Tssr21233 2 157283674 to 157283705 31 + TSS region transcription start site region 21233
Tssr21234 2 157318000 to 157318014 14 + TSS region transcription start site region 21234
Tssr720 2 157320077 to 157320102 25 + TSS region transcription start site region 720
2610007O09Rik 2 157324547 to 157325200 653 unclassified gene RIKEN cDNA 2610007O09 gene
Ghrh 2 157329497 to 157347506 18009 - protein coding gene growth hormone releasing hormone
Tssr27168 2 157337424 to 157337427 3 - TSS region transcription start site region 27168
Tssr27169 2 157346647 to 157346663 16 - TSS region transcription start site region 27169
Tssr27170 2 157346681 to 157346684 3 - TSS region transcription start site region 27170
Gm39974 2 157357508 to 157365181 7673 - lncRNA gene predicted gene, 39974
Tssr21235 2 157367033 to 157367039 6 + TSS region transcription start site region 21235
Tssr21236 2 157367106 to 157367137 31 + TSS region transcription start site region 21236
Tssr21237 2 157367145 to 157367171 26 + TSS region transcription start site region 21237
Tssr21238 2 157367176 to 157367200 24 + TSS region transcription start site region 21238
Cpgi12572 2 157367403 to 157368269 866 CpG island CpG island 12572
Tssr21239 2 157367586 to 157367599 13 + TSS region transcription start site region 21239
Manbal 2 157367594 to 157396763 29169 + protein coding gene mannosidase, beta A, lysosomal-like
Tssr21240 2 157367601 to 157367623 22 + TSS region transcription start site region 21240
Tssr27171 2 157376445 to 157376450 5 - TSS region transcription start site region 27171
Tssr21241 2 157389295 to 157389301 6 + TSS region transcription start site region 21241
Tssr21242 2 157392722 to 157392751 29 + TSS region transcription start site region 21242
Tssr21243 2 157403052 to 157403053 1 + TSS region transcription start site region 21243
Tssr21244 2 157403073 to 157403102 29 + TSS region transcription start site region 21244
Tssr21245 2 157403104 to 157403148 44 + TSS region transcription start site region 21245
Tssr27172 2 157407610 to 157407618 8 - TSS region transcription start site region 27172
Cpgi12573 2 157423549 to 157425121 1572 CpG island CpG island 12573
Tssr21246 2 157423890 to 157423912 22 + TSS region transcription start site region 21246
Src 2 157423901 to 157471838 47937 + protein coding gene Rous sarcoma oncogene
Tssr21247 2 157423913 to 157423944 31 + TSS region transcription start site region 21247
Tssr21248 2 157424135 to 157424150 15 + TSS region transcription start site region 21248
Tssr21249 2 157424217 to 157424252 35 + TSS region transcription start site region 21249
Tssr21250 2 157424255 to 157424322 67 + TSS region transcription start site region 21250
Tssr27173 2 157425160 to 157425197 37 - TSS region transcription start site region 27173
Tssr27174 2 157425674 to 157425696 22 - TSS region transcription start site region 27174
Tssr21251 2 157426364 to 157426383 19 + TSS region transcription start site region 21251
Tssr21252 2 157426404 to 157426427 23 + TSS region transcription start site region 21252
Tssr21253 2 157441969 to 157441972 3 + TSS region transcription start site region 21253
Tssr21254 2 157444385 to 157444407 22 + TSS region transcription start site region 21254
Tssr21255 2 157447707 to 157447738 31 + TSS region transcription start site region 21255
Tssr27175 2 157447945 to 157447950 5 - TSS region transcription start site region 27175
Tssr21256 2 157448752 to 157448760 8 + TSS region transcription start site region 21256
Tssr27176 2 157450983 to 157450989 6 - TSS region transcription start site region 27176
Tssr21257 2 157455996 to 157456008 12 + TSS region transcription start site region 21257
Tssr21258 2 157456015 to 157456026 11 + TSS region transcription start site region 21258
Tssr21259 2 157456917 to 157456946 29 + TSS region transcription start site region 21259
Cpgi12574 2 157456982 to 157457967 985 CpG island CpG island 12574
Tssr27177 2 157457267 to 157457278 11 - TSS region transcription start site region 27177
Tssr21260 2 157457870 to 157457878 8 + TSS region transcription start site region 21260
Tssr21261 2 157464334 to 157464338 4 + TSS region transcription start site region 21261
Tssr21262 2 157470837 to 157470860 23 + TSS region transcription start site region 21262
Tssr21263 2 157471008 to 157471037 29 + TSS region transcription start site region 21263
Tssr21264 2 157471166 to 157471183 17 + TSS region transcription start site region 21264
Tssr21265 2 157471221 to 157471253 32 + TSS region transcription start site region 21265
Tssr21266 2 157471276 to 157471291 15 + TSS region transcription start site region 21266
Tssr21267 2 157500623 to 157500660 37 + TSS region transcription start site region 21267
Tssr27178 2 157501329 to 157501336 7 - TSS region transcription start site region 27178
Tssr27179 2 157514354 to 157514366 12 - TSS region transcription start site region 27179
Gm14279 2 157521697 to 157522028 331 - pseudogene predicted gene 14279
Gm14287 2 157528869 to 157528985 116 - pseudogene predicted gene 14287
Tssr27180 2 157540882 to 157540904 22 - TSS region transcription start site region 27180
Gm14286 2 157544266 to 157545469 1203 - antisense lncRNA gene predicted gene 14286
Tssr27181 2 157555581 to 157555582 1 - TSS region transcription start site region 27181
Blcap 2 157556362 to 157566460 10098 - protein coding gene bladder cancer associated protein
Tssr27182 2 157557606 to 157557609 3 - TSS region transcription start site region 27182
Cpgi12575 2 157559973 to 157560594 621 CpG island CpG island 12575
Nnat 2 157560078 to 157562522 2444 + protein coding gene neuronatin
Tssr21268 2 157560102 to 157560119 17 + TSS region transcription start site region 21268
Tssr21269 2 157560573 to 157560604 31 + TSS region transcription start site region 21269
Tssr21270 2 157560664 to 157560675 11 + TSS region transcription start site region 21270
Tssr21271 2 157560765 to 157560789 24 + TSS region transcription start site region 21271
Tssr21272 2 157560812 to 157560828 16 + TSS region transcription start site region 21272
Tssr27183 2 157560862 to 157560883 21 - TSS region transcription start site region 27183
Tssr27184 2 157560969 to 157560973 4 - TSS region transcription start site region 27184
Cpgi12576 2 157561460 to 157561699 239 CpG island CpG island 12576
Tssr21273 2 157561475 to 157561485 10 + TSS region transcription start site region 21273
Tssr21274 2 157561717 to 157561731 14 + TSS region transcription start site region 21274
Tssr21275 2 157561772 to 157561783 11 + TSS region transcription start site region 21275
Tssr27185 2 157561852 to 157561884 32 - TSS region transcription start site region 27185
Tssr21276 2 157561873 to 157561896 23 + TSS region transcription start site region 21276
Tssr21277 2 157561902 to 157561914 12 + TSS region transcription start site region 21277
Tssr21278 2 157561937 to 157561947 10 + TSS region transcription start site region 21278
Tssr27186 2 157561979 to 157562014 35 - TSS region transcription start site region 27186
Tssr21279 2 157562029 to 157562032 3 + TSS region transcription start site region 21279
Tssr21280 2 157562108 to 157562144 36 + TSS region transcription start site region 21280
Tssr21281 2 157562155 to 157562218 63 + TSS region transcription start site region 21281
Tssr21282 2 157562280 to 157562291 11 + TSS region transcription start site region 21282
Tssr21283 2 157562294 to 157562320 26 + TSS region transcription start site region 21283
Gm23134 2 157562361 to 157562447 86 - miRNA gene predicted gene, 23134
Tssr721 2 157562441 to 157562457 16 - TSS region transcription start site region 721
Cpgi12577 2 157565670 to 157566965 1295 CpG island CpG island 12577
Tssr27187 2 157566294 to 157566305 11 - TSS region transcription start site region 27187
Tssr27188 2 157566319 to 157566350 31 - TSS region transcription start site region 27188
Tssr21284 2 157566620 to 157566641 21 + TSS region transcription start site region 21284
Tssr27189 2 157566700 to 157566723 23 - TSS region transcription start site region 27189
Tssr21285 2 157566930 to 157566941 11 + TSS region transcription start site region 21285
Tssr27190 2 157569504 to 157569515 11 - TSS region transcription start site region 27190
Tssr27191 2 157571270 to 157571289 19 - TSS region transcription start site region 27191
Tssr27192 2 157571304 to 157571316 12 - TSS region transcription start site region 27192
Tssr27193 2 157571435 to 157571447 12 - TSS region transcription start site region 27193
Platr27 2 157595583 to 157597320 1737 - lincRNA gene pluripotency associated transcript 27
Tssr27194 2 157597308 to 157597326 18 - TSS region transcription start site region 27194
Bodwt3 2 157599562 to 157599562 0 QTL body weight 3
Bdln10 2 157599562 to 157599562 0 QTL body length 10
Cpgi12578 2 157605120 to 157605320 200 CpG island CpG island 12578
D2Mit496.2 2 157643126 to 157643280 154 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 496.2
D2Mit496 2 157643293 to 157643417 124 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 496
Cpgi12579 2 157674976 to 157675220 244 CpG island CpG island 12579
Gm34293 2 157676563 to 157682459 5896 + lncRNA gene predicted gene, 34293
Gm25407 2 157713668 to 157713801 133 - snoRNA gene predicted gene, 25407
Gm23463 2 157726000 to 157726098 98 + snRNA gene predicted gene, 23463
Cpgi12580 2 157737202 to 157737810 608 CpG island CpG island 12580
Ctnnbl1 2 157737401 to 157891614 154213 + protein coding gene catenin, beta like 1
Tssr21286 2 157737425 to 157737490 65 + TSS region transcription start site region 21286
Cpgi12581 2 157751891 to 157752192 301 CpG island CpG island 12581
Tssr21287 2 157788551 to 157788557 6 + TSS region transcription start site region 21287
Tssr21288 2 157793506 to 157793523 17 + TSS region transcription start site region 21288
Tssr21289 2 157793545 to 157793555 10 + TSS region transcription start site region 21289
Tssr722 2 157794225 to 157794232 7 - TSS region transcription start site region 722
Tssr27195 2 157794234 to 157794257 23 - TSS region transcription start site region 27195
Tssr27196 2 157794260 to 157794267 7 - TSS region transcription start site region 27196
Tssr21290 2 157797349 to 157797352 3 + TSS region transcription start site region 21290
Tssr21291 2 157817958 to 157817983 25 + TSS region transcription start site region 21291
Tssr21292 2 157832303 to 157832315 12 + TSS region transcription start site region 21292
Tssr21293 2 157901448 to 157901477 29 + TSS region transcription start site region 21293
Gm14176 2 157901536 to 157902012 476 + pseudogene predicted gene 14176
Cpgi12582 2 157913470 to 157913720 250 CpG island CpG island 12582
D2Mit55 2 157913751 to 157913920 169 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 55
Cpgi12583 2 157914164 to 157915525 1361 CpG island CpG island 12583
Tssr21294 2 157914618 to 157914653 35 + TSS region transcription start site region 21294
Vstm2l 2 157914653 to 157944719 30066 + protein coding gene V-set and transmembrane domain containing 2-like
Tssr21295 2 157914660 to 157914671 11 + TSS region transcription start site region 21295
Tssr723 2 157914673 to 157914680 7 + TSS region transcription start site region 723
Cpgi12584 2 157927504 to 157927702 198 CpG island CpG island 12584
C030015D19Rik 2 157938462 to 157942410 3948 unclassified gene RIKEN cDNA C030015D19 gene
Cpgi12585 2 157940860 to 157941526 666 CpG island CpG island 12585
Cpgi12586 2 157943501 to 157944890 1389 CpG island CpG island 12586
Tti1 2 157981803 to 158028433 46630 - protein coding gene TELO2 interacting protein 1
Gm34402 2 157986141 to 157992957 6816 - lncRNA gene predicted gene, 34402
Tssr27197 2 157997146 to 157997179 33 - TSS region transcription start site region 27197