Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:156840069-157410082

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189 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12560 2 156839242 to 156841938 2696 CpG island CpG island 12560
Tgif2 2 156840007 to 156855570 15563 + protein coding gene TGFB-induced factor homeobox 2
Tssr21210 2 156840081 to 156840141 60 + TSS region transcription start site region 21210
Tssr21211 2 156840153 to 156840164 11 + TSS region transcription start site region 21211
Tssr21212 2 156840699 to 156840740 41 + TSS region transcription start site region 21212
Tssr21213 2 156840960 to 156840986 26 + TSS region transcription start site region 21213
Tssr21214 2 156840991 to 156841017 26 + TSS region transcription start site region 21214
Gm37790 2 156846370 to 156849715 3345 - unclassified gene predicted gene, 37790
5430405H02Rik 2 156852403 to 156862945 10542 - lncRNA gene RIKEN cDNA 5430405H02 gene
4930518I15Rik 2 156856616 to 156857946 1330 - unclassified gene RIKEN cDNA 4930518I15 gene
Tssr27062 2 156857125 to 156857134 9 - TSS region transcription start site region 27062
Gm27651 2 156860305 to 156860550 245 + unclassified non-coding RNA gene predicted gene, 27651
Cpgi12561 2 156862613 to 156863883 1270 CpG island CpG island 12561
Tssr27063 2 156862757 to 156862795 38 - TSS region transcription start site region 27063
Tssr27064 2 156862830 to 156862855 25 - TSS region transcription start site region 27064
Tssr27065 2 156862917 to 156862964 47 - TSS region transcription start site region 27065
Tssr27066 2 156862965 to 156863006 41 - TSS region transcription start site region 27066
Tssr21215 2 156863110 to 156863170 60 + TSS region transcription start site region 21215
Rab5if 2 156863128 to 156873563 10435 + protein coding gene RAB5 interacting factor
Tssr21216 2 156863175 to 156863186 11 + TSS region transcription start site region 21216
Sla2 2 156872457 to 156887192 14735 - protein coding gene Src-like-adaptor 2
Tssr21217 2 156872498 to 156872514 16 + TSS region transcription start site region 21217
Tssr27067 2 156881259 to 156881268 9 - TSS region transcription start site region 27067
Tssr27068 2 156887056 to 156887084 28 - TSS region transcription start site region 27068
Tssr27069 2 156887172 to 156887225 53 - TSS region transcription start site region 27069
Tssr27070 2 156887231 to 156887240 9 - TSS region transcription start site region 27070
Gm14248 2 156889464 to 156890007 543 + pseudogene predicted gene 14248
Tssr21218 2 156889520 to 156889540 20 + TSS region transcription start site region 21218
Gm14247 2 156892882 to 156893118 236 - pseudogene predicted gene 14247
Gm14278 2 156912223 to 156915381 3158 - pseudogene predicted gene 14278
Ndrg3 2 156927345 to 156992056 64711 - protein coding gene N-myc downstream regulated gene 3
Tssr27071 2 156928047 to 156928084 37 - TSS region transcription start site region 27071
Tssr27072 2 156928603 to 156928619 16 - TSS region transcription start site region 27072
Tssr27073 2 156928685 to 156928702 17 - TSS region transcription start site region 27073
Tssr27074 2 156943423 to 156943426 3 - TSS region transcription start site region 27074
Tssr27075 2 156953354 to 156953361 7 - TSS region transcription start site region 27075
Tssr27076 2 156953363 to 156953378 15 - TSS region transcription start site region 27076
Tssr27077 2 156953387 to 156953404 17 - TSS region transcription start site region 27077
Gm27653 2 156964158 to 156964293 135 - snoRNA gene predicted gene, 27653
Tssr27078 2 156970280 to 156970293 13 - TSS region transcription start site region 27078
Tssr27079 2 156970405 to 156970418 13 - TSS region transcription start site region 27079
Tssr27080 2 156970484 to 156970494 10 - TSS region transcription start site region 27080
Tssr27081 2 156970502 to 156970520 18 - TSS region transcription start site region 27081
Tssr27082 2 156970553 to 156970573 20 - TSS region transcription start site region 27082
A830037D11Rik 2 156983496 to 156984795 1299 unclassified gene RIKEN cDNA A830037D11 gene
Cpgi12562 2 156991492 to 156992292 800 CpG island CpG island 12562
Tssr27083 2 156991806 to 156991835 29 - TSS region transcription start site region 27083
Tssr27084 2 156991838 to 156991847 9 - TSS region transcription start site region 27084
Tssr27085 2 156991987 to 156992005 18 - TSS region transcription start site region 27085
Tssr27086 2 156992021 to 156992119 98 - TSS region transcription start site region 27086
Gm14276 2 156994173 to 156994892 719 - pseudogene predicted gene 14276
Dsn1 2 156995265 to 157007154 11889 - protein coding gene DSN1 homolog, MIS12 kinetochore complex component
Cpgi12563 2 157006533 to 157007613 1080 CpG island CpG island 12563
Tssr27087 2 157006846 to 157006892 46 - TSS region transcription start site region 27087
Tssr27088 2 157007015 to 157007038 23 - TSS region transcription start site region 27088
Tssr27089 2 157007039 to 157007082 43 - TSS region transcription start site region 27089
Soga1 2 157015799 to 157079254 63455 - protein coding gene suppressor of glucose, autophagy associated 1
Tssr27090 2 157017531 to 157017535 4 - TSS region transcription start site region 27090
Cpgi12564 2 157020592 to 157021394 802 CpG island CpG island 12564
Tssr27091 2 157026033 to 157026037 4 - TSS region transcription start site region 27091
Tssr27092 2 157027749 to 157027758 9 - TSS region transcription start site region 27092
Tssr27093 2 157027793 to 157027804 11 - TSS region transcription start site region 27093
Cpgi12565 2 157039916 to 157040904 988 CpG island CpG island 12565
Tssr27094 2 157057917 to 157057957 40 - TSS region transcription start site region 27094
Tssr27095 2 157058719 to 157058725 6 - TSS region transcription start site region 27095
Tssr27096 2 157058728 to 157058753 25 - TSS region transcription start site region 27096
Tssr27097 2 157058758 to 157058771 13 - TSS region transcription start site region 27097
Cpgi12566 2 157058817 to 157059028 211 CpG island CpG island 12566
Cpgi12567 2 157060158 to 157060381 223 CpG island CpG island 12567
Cpgi12568 2 157077579 to 157080064 2485 CpG island CpG island 12568
Tssr27098 2 157079081 to 157079121 40 - TSS region transcription start site region 27098
Tssr27099 2 157079124 to 157079149 25 - TSS region transcription start site region 27099
Tssr27100 2 157079197 to 157079209 12 - TSS region transcription start site region 27100
Tssr27101 2 157079212 to 157079276 64 - TSS region transcription start site region 27101
Tssr27102 2 157079331 to 157079354 23 - TSS region transcription start site region 27102
Tssr27103 2 157079634 to 157079679 45 - TSS region transcription start site region 27103
Tssr21219 2 157085069 to 157085076 7 + TSS region transcription start site region 21219
Tssr21220 2 157086998 to 157087041 43 + TSS region transcription start site region 21220
Tssr21221 2 157087042 to 157087054 12 + TSS region transcription start site region 21221
Tldc2 2 157087055 to 157096482 9427 + protein coding gene TBC/LysM associated domain containing 2
Samhd1 2 157097533 to 157135265 37732 - protein coding gene SAM domain and HD domain, 1
Tssr27104 2 157098458 to 157098473 15 - TSS region transcription start site region 27104
Tssr27105 2 157098503 to 157098521 18 - TSS region transcription start site region 27105
Tssr27106 2 157098592 to 157098624 32 - TSS region transcription start site region 27106
Tssr27107 2 157098736 to 157098747 11 - TSS region transcription start site region 27107
Tssr27108 2 157098862 to 157098880 18 - TSS region transcription start site region 27108
Tssr27109 2 157098934 to 157098947 13 - TSS region transcription start site region 27109
Tssr27110 2 157098988 to 157099015 27 - TSS region transcription start site region 27110
Tssr27111 2 157099139 to 157099153 14 - TSS region transcription start site region 27111
Tssr27112 2 157099169 to 157099180 11 - TSS region transcription start site region 27112
Tssr27113 2 157099186 to 157099208 22 - TSS region transcription start site region 27113
Tssr27114 2 157099260 to 157099279 19 - TSS region transcription start site region 27114
Tssr27115 2 157099376 to 157099390 14 - TSS region transcription start site region 27115
Tssr27116 2 157099473 to 157099535 62 - TSS region transcription start site region 27116
Tssr21222 2 157101053 to 157101166 113 + TSS region transcription start site region 21222
Tssr27117 2 157101168 to 157101175 7 - TSS region transcription start site region 27117
Tssr27118 2 157101210 to 157101228 18 - TSS region transcription start site region 27118
Tssr27119 2 157101230 to 157101270 40 - TSS region transcription start site region 27119
Tssr27120 2 157101277 to 157101290 13 - TSS region transcription start site region 27120
Tssr27121 2 157101313 to 157101322 9 - TSS region transcription start site region 27121
Tssr27122 2 157101323 to 157101334 11 - TSS region transcription start site region 27122
Tssr27123 2 157101378 to 157101389 11 - TSS region transcription start site region 27123
Tssr27124 2 157101392 to 157101439 47 - TSS region transcription start site region 27124
Tssr27125 2 157101480 to 157101496 16 - TSS region transcription start site region 27125
Tssr27126 2 157101630 to 157101649 19 - TSS region transcription start site region 27126
Tssr21223 2 157101639 to 157101651 12 + TSS region transcription start site region 21223
Tssr27127 2 157101710 to 157101723 13 - TSS region transcription start site region 27127
Tssr27128 2 157101760 to 157101796 36 - TSS region transcription start site region 27128
Tssr27129 2 157104341 to 157104373 32 - TSS region transcription start site region 27129
Tssr27130 2 157105662 to 157105679 17 - TSS region transcription start site region 27130
Tssr27131 2 157106256 to 157106290 34 - TSS region transcription start site region 27131
Tssr27132 2 157107454 to 157107466 12 - TSS region transcription start site region 27132
Tssr27133 2 157107507 to 157107518 11 - TSS region transcription start site region 27133
Tssr27134 2 157107536 to 157107554 18 - TSS region transcription start site region 27134
Tssr27135 2 157107564 to 157107567 3 - TSS region transcription start site region 27135
Tssr27136 2 157109452 to 157109482 30 - TSS region transcription start site region 27136
Tssr27137 2 157109484 to 157109518 34 - TSS region transcription start site region 27137
Tssr27138 2 157110591 to 157110645 54 - TSS region transcription start site region 27138
Tssr27139 2 157111684 to 157111700 16 - TSS region transcription start site region 27139
Tssr27140 2 157112518 to 157112535 17 - TSS region transcription start site region 27140
Tssr27141 2 157112837 to 157112864 27 - TSS region transcription start site region 27141
Tssr27142 2 157113402 to 157113405 3 - TSS region transcription start site region 27142
Tssr27143 2 157114277 to 157114326 49 - TSS region transcription start site region 27143
Tssr27144 2 157119592 to 157119597 5 - TSS region transcription start site region 27144
Tssr27145 2 157120510 to 157120528 18 - TSS region transcription start site region 27145
Tssr27146 2 157121903 to 157121918 15 - TSS region transcription start site region 27146
Tssr27147 2 157121969 to 157121977 8 - TSS region transcription start site region 27147
Tssr27148 2 157123331 to 157123348 17 - TSS region transcription start site region 27148
Tssr27149 2 157123364 to 157123429 65 - TSS region transcription start site region 27149
Tssr27150 2 157124956 to 157124985 29 - TSS region transcription start site region 27150
Tssr27151 2 157125069 to 157125082 13 - TSS region transcription start site region 27151
Tssr27152 2 157125112 to 157125130 18 - TSS region transcription start site region 27152
Tssr27153 2 157129982 to 157129992 10 - TSS region transcription start site region 27153
Tssr27154 2 157130019 to 157130034 15 - TSS region transcription start site region 27154
Tssr27155 2 157130041 to 157130063 22 - TSS region transcription start site region 27155
Tssr27156 2 157130738 to 157130746 8 - TSS region transcription start site region 27156
Tssr27157 2 157131186 to 157131195 9 - TSS region transcription start site region 27157
Tssr27158 2 157133971 to 157133974 3 - TSS region transcription start site region 27158
Tssr27159 2 157134138 to 157134143 5 - TSS region transcription start site region 27159
Tssr21224 2 157134484 to 157134487 3 + TSS region transcription start site region 21224
Cpgi12569 2 157134551 to 157135458 907 CpG island CpG island 12569
Tssr27160 2 157135085 to 157135110 25 - TSS region transcription start site region 27160
Tssr27161 2 157135112 to 157135134 22 - TSS region transcription start site region 27161
Tssr27162 2 157135200 to 157135215 15 - TSS region transcription start site region 27162
Tssr21225 2 157135801 to 157135806 5 + TSS region transcription start site region 21225
Rbl1 2 157145893 to 157204534 58641 - protein coding gene RB transcriptional corepressor like 1
Gm14277 2 157168820 to 157169179 359 + pseudogene predicted gene 14277
Tssr719 2 157201668 to 157201703 35 - TSS region transcription start site region 719
Tssr21226 2 157201782 to 157201785 3 + TSS region transcription start site region 21226
Cpgi12570 2 157203761 to 157205124 1363 CpG island CpG island 12570
Tssr21227 2 157204276 to 157204316 40 + TSS region transcription start site region 21227
2610301H18Rik 2 157204303 to 157206813 2510 protein coding gene RIKEN cDNA 2610301H18 gene
Tssr27163 2 157204444 to 157204462 18 - TSS region transcription start site region 27163
Tssr27164 2 157204483 to 157204542 59 - TSS region transcription start site region 27164
Mroh8 2 157208550 to 157279549 70999 - protein coding gene maestro heat-like repeat family member 8
Cpgi12571 2 157278821 to 157279839 1018 CpG island CpG island 12571
Tssr21228 2 157278998 to 157279025 27 + TSS region transcription start site region 21228
Rpn2 2 157279017 to 157326319 47302 + protein coding gene ribophorin II
Tssr21229 2 157279026 to 157279064 38 + TSS region transcription start site region 21229
Tssr21230 2 157279065 to 157279130 65 + TSS region transcription start site region 21230
Tssr21231 2 157279278 to 157279317 39 + TSS region transcription start site region 21231
Tssr27165 2 157279512 to 157279518 6 - TSS region transcription start site region 27165
Tssr27166 2 157279519 to 157279555 36 - TSS region transcription start site region 27166
Tssr27167 2 157279556 to 157279578 22 - TSS region transcription start site region 27167
Tssr21232 2 157283575 to 157283593 18 + TSS region transcription start site region 21232
Tssr21233 2 157283674 to 157283705 31 + TSS region transcription start site region 21233
Tssr21234 2 157318000 to 157318014 14 + TSS region transcription start site region 21234
Tssr720 2 157320077 to 157320102 25 + TSS region transcription start site region 720
2610007O09Rik 2 157324547 to 157325200 653 unclassified gene RIKEN cDNA 2610007O09 gene
Ghrh 2 157329497 to 157347506 18009 - protein coding gene growth hormone releasing hormone
Tssr27168 2 157337424 to 157337427 3 - TSS region transcription start site region 27168
Tssr27169 2 157346647 to 157346663 16 - TSS region transcription start site region 27169
Tssr27170 2 157346681 to 157346684 3 - TSS region transcription start site region 27170
Gm39974 2 157357508 to 157365181 7673 - lncRNA gene predicted gene, 39974
Tssr21235 2 157367033 to 157367039 6 + TSS region transcription start site region 21235
Tssr21236 2 157367106 to 157367137 31 + TSS region transcription start site region 21236
Tssr21237 2 157367145 to 157367171 26 + TSS region transcription start site region 21237
Tssr21238 2 157367176 to 157367200 24 + TSS region transcription start site region 21238
Cpgi12572 2 157367403 to 157368269 866 CpG island CpG island 12572
Tssr21239 2 157367586 to 157367599 13 + TSS region transcription start site region 21239
Manbal 2 157367594 to 157396763 29169 + protein coding gene mannosidase, beta A, lysosomal-like
Tssr21240 2 157367601 to 157367623 22 + TSS region transcription start site region 21240
Tssr27171 2 157376445 to 157376450 5 - TSS region transcription start site region 27171
Tssr21241 2 157389295 to 157389301 6 + TSS region transcription start site region 21241
Tssr21242 2 157392722 to 157392751 29 + TSS region transcription start site region 21242
Tssr21243 2 157403052 to 157403053 1 + TSS region transcription start site region 21243
Tssr21244 2 157403073 to 157403102 29 + TSS region transcription start site region 21244
Tssr21245 2 157403104 to 157403148 44 + TSS region transcription start site region 21245
Tssr27172 2 157407610 to 157407618 8 - TSS region transcription start site region 27172