Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:156517387-156927394

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epb41l1 2 156420909 to 156543214 122305 + protein coding gene erythrocyte membrane protein band 4.1 like 1
Tssr21174 2 156530041 to 156530044 3 + TSS region transcription start site region 21174
Tssr21175 2 156538767 to 156538769 2 + TSS region transcription start site region 21175
Tssr21176 2 156540110 to 156540160 50 + TSS region transcription start site region 21176
D2Abb3e 2 156540257 to 156540498 241 DNA segment DNA segment, Chr 2, Abbott 3 expressed
Cpgi12552 2 156547439 to 156547898 459 CpG island CpG island 12552
Tssr21177 2 156547570 to 156547614 44 + TSS region transcription start site region 21177
Aar2 2 156547584 to 156568972 21388 + protein coding gene AAR2 splicing factor homolog
Gm14168 2 156571792 to 156577457 5665 + lincRNA gene predicted gene 14168
Gm14169 2 156609206 to 156613422 4216 - lncRNA gene predicted gene 14169
Cpgi12553 2 156612794 to 156614864 2070 CpG island CpG island 12553
Tssr21178 2 156613466 to 156613491 25 + TSS region transcription start site region 21178
Tssr21179 2 156613628 to 156613639 11 + TSS region transcription start site region 21179
Tssr21180 2 156613643 to 156613661 18 + TSS region transcription start site region 21180
Tssr21181 2 156613664 to 156613706 42 + TSS region transcription start site region 21181
Dlgap4 2 156613705 to 156764363 150658 + protein coding gene DLG associated protein 4
Gm14174 2 156614447 to 156615448 1001 - lincRNA gene predicted gene 14174
Cpgi12554 2 156615018 to 156615463 445 CpG island CpG island 12554
Gm14172 2 156632825 to 156633468 643 - pseudogene predicted gene 14172
Cpgi12555 2 156683179 to 156683340 161 CpG island CpG island 12555
Gm34111 2 156696277 to 156708001 11724 - lncRNA gene predicted gene, 34111
Cpgi12556 2 156704488 to 156704648 160 CpG island CpG island 12556
4930405A21Rik 2 156714540 to 156720909 6369 - lncRNA gene RIKEN cDNA 4930405A21 gene
Cpgi12557 2 156720354 to 156722157 1803 CpG island CpG island 12557
Tssr27055 2 156720770 to 156720828 58 - TSS region transcription start site region 27055
Tssr21182 2 156721009 to 156721030 21 + TSS region transcription start site region 21182
Tssr21183 2 156721037 to 156721055 18 + TSS region transcription start site region 21183
Tssr21184 2 156721069 to 156721084 15 + TSS region transcription start site region 21184
Tssr21185 2 156721085 to 156721094 9 + TSS region transcription start site region 21185
Tssr21186 2 156721274 to 156721290 16 + TSS region transcription start site region 21186
Tssr21187 2 156721293 to 156721302 9 + TSS region transcription start site region 21187
Tssr21188 2 156721310 to 156721335 25 + TSS region transcription start site region 21188
Tssr21189 2 156721340 to 156721345 5 + TSS region transcription start site region 21189
Tssr21190 2 156721364 to 156721386 22 + TSS region transcription start site region 21190
Tssr21191 2 156721631 to 156721646 15 + TSS region transcription start site region 21191
Tssr21192 2 156721663 to 156721680 17 + TSS region transcription start site region 21192
Tssr21193 2 156721845 to 156721870 25 + TSS region transcription start site region 21193
Tssr27056 2 156722387 to 156722394 7 - TSS region transcription start site region 27056
Tssr21194 2 156730620 to 156730638 18 + TSS region transcription start site region 21194
Tssr21195 2 156730647 to 156730690 43 + TSS region transcription start site region 21195
Tssr21196 2 156730706 to 156730727 21 + TSS region transcription start site region 21196
Tssr21197 2 156730949 to 156730989 40 + TSS region transcription start site region 21197
Tssr21198 2 156735319 to 156735337 18 + TSS region transcription start site region 21198
Tssr21199 2 156743768 to 156743773 5 + TSS region transcription start site region 21199
Tssr21200 2 156745825 to 156745841 16 + TSS region transcription start site region 21200
Tssr21201 2 156749159 to 156749205 46 + TSS region transcription start site region 21201
Tssr718 2 156755347 to 156755350 3 + TSS region transcription start site region 718
Tssr21202 2 156775163 to 156775209 46 + TSS region transcription start site region 21202
Cpgi12558 2 156775348 to 156775544 196 CpG island CpG island 12558
Tssr21203 2 156775391 to 156775402 11 + TSS region transcription start site region 21203
Tssr21204 2 156775409 to 156775432 23 + TSS region transcription start site region 21204
Myl9 2 156775420 to 156781658 6238 + protein coding gene myosin, light polypeptide 9, regulatory
Tssr21205 2 156775443 to 156775469 26 + TSS region transcription start site region 21205
Tssr27057 2 156780515 to 156780523 8 - TSS region transcription start site region 27057
Tssr21206 2 156780522 to 156780534 12 + TSS region transcription start site region 21206
Cpgi12559 2 156780938 to 156781313 375 CpG island CpG island 12559
Tssr21207 2 156781144 to 156781237 93 + TSS region transcription start site region 21207
Tssr27058 2 156781183 to 156781194 11 - TSS region transcription start site region 27058
Tssr27059 2 156781577 to 156781593 16 - TSS region transcription start site region 27059
Gm14231 2 156789812 to 156790403 591 - pseudogene predicted gene 14231
Gm14230 2 156833049 to 156839892 6843 - lincRNA gene predicted gene 14230
D2Ertd92e 2 156836223 to 156836427 204 DNA segment DNA segment, Chr 2, ERATO Doi 92, expressed
Cpgi12560 2 156839242 to 156841938 2696 CpG island CpG island 12560
Tssr27060 2 156839738 to 156839759 21 - TSS region transcription start site region 27060
Tssr27061 2 156839790 to 156839858 68 - TSS region transcription start site region 27061
Tssr21208 2 156839815 to 156839826 11 + TSS region transcription start site region 21208
Tgif2 2 156840007 to 156855570 15563 + protein coding gene TGFB-induced factor homeobox 2
Tssr21209 2 156840021 to 156840032 11 + TSS region transcription start site region 21209
Tssr21210 2 156840081 to 156840141 60 + TSS region transcription start site region 21210
Tssr21211 2 156840153 to 156840164 11 + TSS region transcription start site region 21211
Tssr21212 2 156840699 to 156840740 41 + TSS region transcription start site region 21212
Tssr21213 2 156840960 to 156840986 26 + TSS region transcription start site region 21213
Tssr21214 2 156840991 to 156841017 26 + TSS region transcription start site region 21214
Gm37790 2 156846370 to 156849715 3345 - unclassified gene predicted gene, 37790
5430405H02Rik 2 156852403 to 156862945 10542 - lncRNA gene RIKEN cDNA 5430405H02 gene
4930518I15Rik 2 156856616 to 156857946 1330 - unclassified gene RIKEN cDNA 4930518I15 gene
Tssr27062 2 156857125 to 156857134 9 - TSS region transcription start site region 27062
Gm27651 2 156860305 to 156860550 245 + unclassified non-coding RNA gene predicted gene, 27651
Cpgi12561 2 156862613 to 156863883 1270 CpG island CpG island 12561
Tssr27063 2 156862757 to 156862795 38 - TSS region transcription start site region 27063
Tssr27064 2 156862830 to 156862855 25 - TSS region transcription start site region 27064
Tssr27065 2 156862917 to 156862964 47 - TSS region transcription start site region 27065
Tssr27066 2 156862965 to 156863006 41 - TSS region transcription start site region 27066
Tssr21215 2 156863110 to 156863170 60 + TSS region transcription start site region 21215
Rab5if 2 156863128 to 156873563 10435 + protein coding gene RAB5 interacting factor
Tssr21216 2 156863175 to 156863186 11 + TSS region transcription start site region 21216
Sla2 2 156872457 to 156887192 14735 - protein coding gene Src-like-adaptor 2
Tssr21217 2 156872498 to 156872514 16 + TSS region transcription start site region 21217
Tssr27067 2 156881259 to 156881268 9 - TSS region transcription start site region 27067
Tssr27068 2 156887056 to 156887084 28 - TSS region transcription start site region 27068
Tssr27069 2 156887172 to 156887225 53 - TSS region transcription start site region 27069
Tssr27070 2 156887231 to 156887240 9 - TSS region transcription start site region 27070
Gm14248 2 156889464 to 156890007 543 + pseudogene predicted gene 14248
Tssr21218 2 156889520 to 156889540 20 + TSS region transcription start site region 21218
Gm14247 2 156892882 to 156893118 236 - pseudogene predicted gene 14247
Gm14278 2 156912223 to 156915381 3158 - pseudogene predicted gene 14278
Ndrg3 2 156927345 to 156992056 64711 - protein coding gene N-myc downstream regulated gene 3