Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:155637303-155953059

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trpc4ap 2 155634277 to 155692384 58107 - protein coding gene transient receptor potential cation channel, subfamily C, member 4 associated protein
Tssr26999 2 155640641 to 155640669 28 - TSS region transcription start site region 26999
Tssr27000 2 155640712 to 155640723 11 - TSS region transcription start site region 27000
Tssr27001 2 155640742 to 155640756 14 - TSS region transcription start site region 27001
D2Mit451 2 155649655 to 155649770 115 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 451
D2Dcr110 2 155649660 to 155649774 114 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 110
Tssr27002 2 155651824 to 155651829 5 - TSS region transcription start site region 27002
Tssr27003 2 155652801 to 155652805 4 - TSS region transcription start site region 27003
Gm22334 2 155652892 to 155653024 132 - snoRNA gene predicted gene, 22334
Tssr27004 2 155653535 to 155653554 19 - TSS region transcription start site region 27004
Tssr27005 2 155668443 to 155668447 4 - TSS region transcription start site region 27005
Tssr21112 2 155679820 to 155679823 3 + TSS region transcription start site region 21112
Cpgi12528 2 155691709 to 155692568 859 CpG island CpG island 12528
Tssr27006 2 155692317 to 155692339 22 - TSS region transcription start site region 27006
Tssr27007 2 155692355 to 155692364 9 - TSS region transcription start site region 27007
Tssr27008 2 155692376 to 155692387 11 - TSS region transcription start site region 27008
Edem2 2 155701677 to 155729475 27798 - protein coding gene ER degradation enhancer, mannosidase alpha-like 2
Cpgi12529 2 155728889 to 155729572 683 CpG island CpG island 12529
Tssr27009 2 155729359 to 155729443 84 - TSS region transcription start site region 27009
Gm17581 2 155735810 to 155735866 56 - protein coding gene predicted gene, 17581
Tssr21113 2 155747139 to 155747148 9 + TSS region transcription start site region 21113
Tssr21114 2 155747177 to 155747189 12 + TSS region transcription start site region 21114
Tssr21115 2 155750779 to 155750794 15 + TSS region transcription start site region 21115
Tssr21116 2 155750805 to 155750819 14 + TSS region transcription start site region 21116
Cpgi12530 2 155750892 to 155751426 534 CpG island CpG island 12530
Tssr21117 2 155751110 to 155751120 10 + TSS region transcription start site region 21117
Procr 2 155751125 to 155755478 4353 + protein coding gene protein C receptor, endothelial
Tssr21118 2 155751199 to 155751284 85 + TSS region transcription start site region 21118
Tssr21119 2 155751324 to 155751335 11 + TSS region transcription start site region 21119
Tssr21120 2 155751340 to 155751370 30 + TSS region transcription start site region 21120
Cpgi12531 2 155753560 to 155753766 206 CpG island CpG island 12531
Tssr21121 2 155754945 to 155754957 12 + TSS region transcription start site region 21121
Tssr21122 2 155754984 to 155754994 10 + TSS region transcription start site region 21122
Tssr21123 2 155755000 to 155755014 14 + TSS region transcription start site region 21123
Tssr21124 2 155755055 to 155755068 13 + TSS region transcription start site region 21124
Cpgi12532 2 155774652 to 155776335 1683 CpG island CpG island 12532
Tssr21125 2 155775333 to 155775392 59 + TSS region transcription start site region 21125
Mmp24 2 155775342 to 155818366 43024 + protein coding gene matrix metallopeptidase 24
Tssr21126 2 155778673 to 155778683 10 + TSS region transcription start site region 21126
Gm46772 2 155792303 to 155798059 5756 - lncRNA gene predicted gene, 46772
Cpgi12533 2 155812159 to 155812336 177 CpG island CpG island 12533
BC029722 2 155817730 to 155819203 1473 - lincRNA gene cDNA sequence BC029722
Cpgi12534 2 155818847 to 155819396 549 CpG island CpG island 12534
Tssr27010 2 155818866 to 155818895 29 - TSS region transcription start site region 27010
Tssr27011 2 155819181 to 155819190 9 - TSS region transcription start site region 27011
Tssr27012 2 155819196 to 155819269 73 - TSS region transcription start site region 27012
Tssr27013 2 155819404 to 155819434 30 - TSS region transcription start site region 27013
Eif6 2 155819837 to 155826925 7088 - protein coding gene eukaryotic translation initiation factor 6
Cpgi12535 2 155825980 to 155826875 895 CpG island CpG island 12535
Tssr21127 2 155826138 to 155826151 13 + TSS region transcription start site region 21127
Tssr714 2 155826434 to 155826445 11 - TSS region transcription start site region 714
Tssr27014 2 155826453 to 155826464 11 - TSS region transcription start site region 27014
Tssr27015 2 155826465 to 155826481 16 - TSS region transcription start site region 27015
Tssr27016 2 155826606 to 155826618 12 - TSS region transcription start site region 27016
Tssr27017 2 155826647 to 155826710 63 - TSS region transcription start site region 27017
Gm16098 2 155826788 to 155827953 1165 + antisense lncRNA gene predicted gene 16098
Fam83c 2 155829183 to 155834854 5671 - protein coding gene family with sequence similarity 83, member C
Tssr27018 2 155834845 to 155834861 16 - TSS region transcription start site region 27018
Uqcc1 2 155846894 to 155930310 83416 - protein coding gene ubiquinol-cytochrome c reductase complex assembly factor 1
D2Mit262 2 155867416 to 155867524 108 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 262
D2Dcr111 2 155867417 to 155867515 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 111
Tssr715 2 155869235 to 155869237 2 + TSS region transcription start site region 715
2310008B10Rik 2 155879884 to 155881359 1475 unclassified gene RIKEN cDNA 2310008B10 gene
Cpgi12536 2 155929885 to 155930387 502 CpG island CpG island 12536
Tssr27019 2 155930038 to 155930066 28 - TSS region transcription start site region 27019
Tssr21128 2 155930084 to 155930107 23 + TSS region transcription start site region 21128
Tssr27020 2 155930190 to 155930211 21 - TSS region transcription start site region 27020
Gm15557 2 155940728 to 155942750 2022 + protein coding gene predicted gene 15557
Gdf5 2 155941023 to 155945364 4341 - protein coding gene growth differentiation factor 5
Cpgi12537 2 155941811 to 155942398 587 CpG island CpG island 12537
Tssr27021 2 155945249 to 155945259 10 - TSS region transcription start site region 27021
Tssr27022 2 155945282 to 155945306 24 - TSS region transcription start site region 27022