Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:155196398-155567434

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itch 2 155133509 to 155226855 93346 + protein coding gene itchy, E3 ubiquitin protein ligase
Gm14227 2 155198632 to 155199260 628 - pseudogene predicted gene 14227
Tssr21065 2 155199616 to 155199618 2 + TSS region transcription start site region 21065
Tssr21066 2 155217812 to 155217824 12 + TSS region transcription start site region 21066
Tssr21067 2 155219653 to 155219658 5 + TSS region transcription start site region 21067
Tssr711 2 155219692 to 155219693 1 + TSS region transcription start site region 711
Cpgi12514 2 155236267 to 155237090 823 CpG island CpG island 12514
Tssr21068 2 155236529 to 155236599 70 + TSS region transcription start site region 21068
Dynlrb1 2 155236533 to 155250277 13744 + protein coding gene dynein light chain roadblock-type 1
Tssr21069 2 155236602 to 155236617 15 + TSS region transcription start site region 21069
Tssr21070 2 155246983 to 155246988 5 + TSS region transcription start site region 21070
Tssr21071 2 155247862 to 155247894 32 + TSS region transcription start site region 21071
Tssr21072 2 155249971 to 155250001 30 + TSS region transcription start site region 21072
Tssr712 2 155250003 to 155250014 11 + TSS region transcription start site region 712
Tssr26980 2 155250038 to 155250070 32 - TSS region transcription start site region 26980
Cpgi12515 2 155276036 to 155277454 1418 CpG island CpG island 12515
Tssr21073 2 155276339 to 155276350 11 + TSS region transcription start site region 21073
Map1lc3a 2 155276364 to 155278073 1709 + protein coding gene microtubule-associated protein 1 light chain 3 alpha
Tssr21074 2 155276418 to 155276474 56 + TSS region transcription start site region 21074
Tssr21075 2 155276480 to 155276494 14 + TSS region transcription start site region 21075
Tssr21076 2 155276503 to 155276553 50 + TSS region transcription start site region 21076
Tssr21077 2 155276582 to 155276592 10 + TSS region transcription start site region 21077
Tssr21078 2 155276596 to 155276614 18 + TSS region transcription start site region 21078
Tssr21079 2 155276619 to 155276620 1 + TSS region transcription start site region 21079
Tssr21080 2 155276717 to 155276772 55 + TSS region transcription start site region 21080
Tssr21081 2 155276890 to 155276915 25 + TSS region transcription start site region 21081
Tssr21082 2 155276916 to 155276930 14 + TSS region transcription start site region 21082
Tssr21083 2 155276932 to 155276955 23 + TSS region transcription start site region 21083
Tssr21084 2 155276963 to 155276981 18 + TSS region transcription start site region 21084
Tssr21085 2 155277080 to 155277106 26 + TSS region transcription start site region 21085
Pigu 2 155278243 to 155357424 79181 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class U
Tssr26981 2 155299649 to 155299677 28 - TSS region transcription start site region 26981
Tssr26982 2 155314579 to 155314590 11 - TSS region transcription start site region 26982
Mir695 2 155356817 to 155356925 108 + miRNA gene microRNA 695
Cpgi12516 2 155356947 to 155357605 658 CpG island CpG island 12516
Tssr26983 2 155357392 to 155357431 39 - TSS region transcription start site region 26983
Tssr26984 2 155357471 to 155357480 9 - TSS region transcription start site region 26984
Tssr713 2 155357859 to 155357862 3 + TSS region transcription start site region 713
Cpgi12517 2 155381398 to 155382434 1036 CpG island CpG island 12517
Tssr26985 2 155381680 to 155381687 7 - TSS region transcription start site region 26985
Trp53inp2 2 155381807 to 155389847 8040 + protein coding gene transformation related protein 53 inducible nuclear protein 2
Tssr21086 2 155381808 to 155381884 76 + TSS region transcription start site region 21086
Tssr21087 2 155382186 to 155382274 88 + TSS region transcription start site region 21087
Tssr21088 2 155382284 to 155382299 15 + TSS region transcription start site region 21088
Tssr21089 2 155383033 to 155383044 11 + TSS region transcription start site region 21089
Tssr21090 2 155383048 to 155383066 18 + TSS region transcription start site region 21090
Tssr21091 2 155383071 to 155383080 9 + TSS region transcription start site region 21091
Tssr21092 2 155384564 to 155384568 4 + TSS region transcription start site region 21092
Tssr21093 2 155385890 to 155385916 26 + TSS region transcription start site region 21093
Tssr21094 2 155385925 to 155385949 24 + TSS region transcription start site region 21094
Tssr21095 2 155386110 to 155386134 24 + TSS region transcription start site region 21095
Cpgi12518 2 155386502 to 155386891 389 CpG island CpG island 12518
Tssr21096 2 155386804 to 155386824 20 + TSS region transcription start site region 21096
Tssr21097 2 155386870 to 155386896 26 + TSS region transcription start site region 21097
Tssr21098 2 155386935 to 155386952 17 + TSS region transcription start site region 21098
Tssr21099 2 155386998 to 155387011 13 + TSS region transcription start site region 21099
Tssr21100 2 155387027 to 155387055 28 + TSS region transcription start site region 21100
Tssr21101 2 155389093 to 155389098 5 + TSS region transcription start site region 21101
Ncoa6 2 155390656 to 155473894 83238 - protein coding gene nuclear receptor coactivator 6
Tssr26986 2 155407734 to 155407753 19 - TSS region transcription start site region 26986
Tssr26987 2 155407826 to 155407838 12 - TSS region transcription start site region 26987
Tssr26988 2 155414974 to 155415006 32 - TSS region transcription start site region 26988
Gm17959 2 155427284 to 155427923 639 - pseudogene predicted gene, 17959
Tssr26989 2 155443079 to 155443081 2 - TSS region transcription start site region 26989
Tssr26990 2 155451062 to 155451068 6 - TSS region transcription start site region 26990
Gm14239 2 155459501 to 155460892 1391 - pseudogene predicted gene 14239
D030059C06Rik 2 155461073 to 155466828 5755 unclassified gene RIKEN cDNA D030059C06 gene
Cpgi12519 2 155472919 to 155474174 1255 CpG island CpG island 12519
Tssr26991 2 155473740 to 155473751 11 - TSS region transcription start site region 26991
Tssr26992 2 155473788 to 155473835 47 - TSS region transcription start site region 26992
Gm14238 2 155486047 to 155486369 322 - pseudogene predicted gene 14238
Ggt7 2 155490379 to 155514858 24479 - protein coding gene gamma-glutamyltransferase 7
Tssr26993 2 155495582 to 155495584 2 - TSS region transcription start site region 26993
Tssr26994 2 155499120 to 155499128 8 - TSS region transcription start site region 26994
Cpgi12520 2 155506344 to 155506637 293 CpG island CpG island 12520
Cpgi12521 2 155514528 to 155515039 511 CpG island CpG island 12521
Tssr26995 2 155514796 to 155514860 64 - TSS region transcription start site region 26995
Cpgi12522 2 155517505 to 155518748 1243 CpG island CpG island 12522
Tssr21102 2 155517684 to 155517714 30 + TSS region transcription start site region 21102
Acss2 2 155517953 to 155562746 44793 + protein coding gene acyl-CoA synthetase short-chain family member 2
Tssr21103 2 155518026 to 155518088 62 + TSS region transcription start site region 21103
Tssr21104 2 155518096 to 155518097 1 + TSS region transcription start site region 21104
Mipep-ps 2 155542647 to 155542937 290 + pseudogene mitochondrial intermediate peptidase, pseudogene
Gm20637 2 155546385 to 155546846 461 + pseudogene predicted gene 20637
Acss2os 2 155547040 to 155556930 9890 - antisense lncRNA gene acyl-CoA synthetase short-chain family member 2, opposite strand
Tssr26996 2 155553084 to 155553090 6 - TSS region transcription start site region 26996
Tssr21105 2 155561105 to 155561128 23 + TSS region transcription start site region 21105
Gss 2 155563181 to 155592810 29629 - protein coding gene glutathione synthetase
Tssr21106 2 155567323 to 155567326 3 + TSS region transcription start site region 21106