Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:154426481-154549356

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplaq15 2 111085773 to 154512747 43426974 QTL circadian period of locomotor activity 15
Tssr21012 2 154427035 to 154427046 11 + TSS region transcription start site region 21012
Tssr21013 2 154427071 to 154427089 18 + TSS region transcription start site region 21013
Tssr21014 2 154428739 to 154428768 29 + TSS region transcription start site region 21014
Cpgi12498 2 154436042 to 154437167 1125 CpG island CpG island 12498
Tssr21015 2 154436437 to 154436497 60 + TSS region transcription start site region 21015
Cbfa2t2 2 154436481 to 154539356 102875 + protein coding gene CBFA2/RUNX1 translocation partner 2
Tssr21016 2 154449493 to 154449496 3 + TSS region transcription start site region 21016
Tssr21017 2 154472277 to 154472279 2 + TSS region transcription start site region 21017
Tssr21018 2 154502699 to 154502702 3 + TSS region transcription start site region 21018
Gm18767 2 154507683 to 154508290 607 - pseudogene predicted gene, 18767
D2Mit286 2 154512609 to 154512747 138 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 286
Tssr21019 2 154536311 to 154536313 2 + TSS region transcription start site region 21019
Necab3 2 154544399 to 154558890 14491 - protein coding gene N-terminal EF-hand calcium binding protein 3
Tssr26948 2 154548758 to 154548780 22 - TSS region transcription start site region 26948
Tssr21020 2 154548854 to 154548863 9 + TSS region transcription start site region 21020
Tssr21021 2 154548867 to 154548884 17 + TSS region transcription start site region 21021
Tssr21022 2 154548889 to 154548932 43 + TSS region transcription start site region 21022
1700003F12Rik 2 154548904 to 154550050 1146 + protein coding gene RIKEN cDNA 1700003F12 gene
Tssr21023 2 154549021 to 154549039 18 + TSS region transcription start site region 21023
Cpgi12499 2 154549237 to 154550258 1021 CpG island CpG island 12499