MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:154290380-154418010

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr26937	2	154303845 to 154303849	4	-	TSS region	transcription start site region 26937
Tssr21011	2	154307202 to 154307208	6	+	TSS region	transcription start site region 21011
Bpifb9b	2	154307227 to 154320646	13419	+	protein coding gene	BPI fold containing family B, member 9B
Tssr709	2	154309490 to 154309493	3	+	TSS region	transcription start site region 709
Cdk5rap1	2	154335380 to 154373010	37630	-	protein coding gene	CDK5 regulatory subunit associated protein 1
Tssr26938	2	154354236 to 154354288	52	-	TSS region	transcription start site region 26938
Tssr26939	2	154363973 to 154363989	16	-	TSS region	transcription start site region 26939
Tssr26940	2	154364036 to 154364049	13	-	TSS region	transcription start site region 26940
Cpgi12495	2	154372256 to 154372876	620		CpG island	CpG island 12495
Tssr26941	2	154372702 to 154372735	33	-	TSS region	transcription start site region 26941
Snta1	2	154376314 to 154408084	31770	-	protein coding gene	syntrophin, acidic 1
Cpgi12496	2	154380999 to 154381166	167		CpG island	CpG island 12496
Cpgi12497	2	154407265 to 154408550	1285		CpG island	CpG island 12497
Tssr26942	2	154407980 to 154408003	23	-	TSS region	transcription start site region 26942
Tssr26943	2	154408035 to 154408071	36	-	TSS region	transcription start site region 26943
Tssr26944	2	154408078 to 154408116	38	-	TSS region	transcription start site region 26944
Tssr26945	2	154416463 to 154416466	3	-	TSS region	transcription start site region 26945
Gm39962	2	154416499 to 154421329	4830	-	lncRNA gene	predicted gene, 39962