Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:152762645-153123822

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cox4i2 2 152754173 to 152765037 10864 + protein coding gene cytochrome c oxidase subunit 4I2
D2Wsu107e 2 152762960 to 152763209 249 DNA segment DNA segment, Chr 2, Wayne State University 107, expressed
Tssr26855 2 152765359 to 152765374 15 - TSS region transcription start site region 26855
Cpgi12465 2 152766462 to 152766829 367 CpG island CpG island 12465
Gm23802 2 152772788 to 152772889 101 - miRNA gene predicted gene, 23802
Tssr26856 2 152779039 to 152779058 19 - TSS region transcription start site region 26856
Bcl2l1 2 152780668 to 152831728 51060 - protein coding gene BCL2-like 1
Tssr26857 2 152781941 to 152781966 25 - TSS region transcription start site region 26857
Tssr26858 2 152787623 to 152787645 22 - TSS region transcription start site region 26858
Tssr20832 2 152787797 to 152787827 30 + TSS region transcription start site region 20832
Tssr26859 2 152792575 to 152792585 10 - TSS region transcription start site region 26859
Gm32211 2 152802436 to 152803840 1404 + protein coding gene predicted gene, 32211
Tssr20833 2 152802459 to 152802463 4 + TSS region transcription start site region 20833
Tssr26860 2 152803206 to 152803215 9 - TSS region transcription start site region 26860
Tssr20834 2 152804830 to 152804837 7 + TSS region transcription start site region 20834
Tssr26861 2 152806075 to 152806100 25 - TSS region transcription start site region 26861
A630035D09Rik 2 152807539 to 152811875 4336 unclassified gene RIKEN cDNA A630035D09 gene
Tssr20835 2 152810468 to 152810472 4 + TSS region transcription start site region 20835
Tssr26862 2 152814970 to 152814975 5 - TSS region transcription start site region 26862
Tssr20836 2 152821268 to 152821282 14 + TSS region transcription start site region 20836
Tssr26863 2 152825754 to 152825762 8 - TSS region transcription start site region 26863
Tssr26864 2 152826173 to 152826181 8 - TSS region transcription start site region 26864
Tssr20837 2 152829458 to 152829475 17 + TSS region transcription start site region 20837
Cpgi12466 2 152829475 to 152829747 272 CpG island CpG island 12466
Tssr26865 2 152830218 to 152830256 38 - TSS region transcription start site region 26865
Tssr26866 2 152830266 to 152830279 13 - TSS region transcription start site region 26866
Tssr26867 2 152830410 to 152830417 7 - TSS region transcription start site region 26867
Tssr26868 2 152830480 to 152830495 15 - TSS region transcription start site region 26868
Cpgi12467 2 152830528 to 152831900 1372 CpG island CpG island 12467
Tssr26869 2 152830558 to 152830586 28 - TSS region transcription start site region 26869
Tssr20838 2 152830597 to 152830638 41 + TSS region transcription start site region 20838
Tssr26870 2 152830615 to 152830680 65 - TSS region transcription start site region 26870
Tssr26871 2 152830708 to 152830728 20 - TSS region transcription start site region 26871
Tssr20839 2 152830818 to 152830822 4 + TSS region transcription start site region 20839
Tssr26872 2 152831243 to 152831326 83 - TSS region transcription start site region 26872
Tssr26873 2 152831665 to 152831735 70 - TSS region transcription start site region 26873
Cpgi12468 2 152847836 to 152848339 503 CpG island CpG island 12468
Tssr20840 2 152847961 to 152847972 11 + TSS region transcription start site region 20840
Tpx2 2 152847964 to 152895321 47357 + protein coding gene TPX2, microtubule-associated
Tssr20841 2 152847993 to 152848076 83 + TSS region transcription start site region 20841
D2Dcr107 2 152857288 to 152857446 158 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 107
Chlq13 2 152857301 to 152857441 140 QTL circulating hormone level QTL 13
Rends 2 152857301 to 152857441 140 QTL renal disease susceptibility
D2Mit285 2 152857301 to 152857441 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 285
Bwq9 2 152857301 to 152857441 140 QTL body weight QTL 9
Gnf3 2 152857301 to 169276004 16418703 QTL growth and fatness 3
Gnf5 2 152857301 to 152857441 140 QTL growth and fatness 5
Gnf2 2 152857301 to 162355165 9497864 QTL growth and fatness 2
Mir5622 2 152865067 to 152865126 59 + miRNA gene microRNA 5622
Tssr20842 2 152867242 to 152867264 22 + TSS region transcription start site region 20842
Tssr20843 2 152869452 to 152869461 9 + TSS region transcription start site region 20843
Tssr20844 2 152869542 to 152869553 11 + TSS region transcription start site region 20844
Tssr20845 2 152876545 to 152876582 37 + TSS region transcription start site region 20845
Tssr20846 2 152876594 to 152876608 14 + TSS region transcription start site region 20846
Tssr20847 2 152905007 to 152905010 3 + TSS region transcription start site region 20847
Tssr695 2 152907855 to 152907859 4 + TSS region transcription start site region 695
Tssr20848 2 152911311 to 152911366 55 + TSS region transcription start site region 20848
Mylk2 2 152911352 to 152923068 11716 + protein coding gene myosin, light polypeptide kinase 2, skeletal muscle
Tssr20849 2 152911376 to 152911377 1 + TSS region transcription start site region 20849
Tssr20850 2 152911385 to 152911396 11 + TSS region transcription start site region 20850
Tssr696 2 152911646 to 152911681 35 + TSS region transcription start site region 696
Tssr20851 2 152911763 to 152911769 6 + TSS region transcription start site region 20851
Foxs1 2 152931898 to 152933208 1310 - protein coding gene forkhead box S1
Tssr20852 2 152931938 to 152931945 7 + TSS region transcription start site region 20852
Cpgi12469 2 152932419 to 152933053 634 CpG island CpG island 12469
Tssr26874 2 152933165 to 152933189 24 - TSS region transcription start site region 26874
Tssr26875 2 152933202 to 152933218 16 - TSS region transcription start site region 26875
Dusp15 2 152940997 to 152951698 10701 - protein coding gene dual specificity phosphatase-like 15
Cpgi12470 2 152942645 to 152943822 1177 CpG island CpG island 12470
Cpgi12471 2 152951178 to 152952126 948 CpG island CpG island 12471
Tssr26876 2 152951527 to 152951540 13 - TSS region transcription start site region 26876
Tssr26877 2 152951547 to 152951608 61 - TSS region transcription start site region 26877
Tssr26878 2 152951662 to 152951675 13 - TSS region transcription start site region 26878
Tssr26879 2 152951688 to 152951700 12 - TSS region transcription start site region 26879
Cpgi12472 2 152962282 to 152962884 602 CpG island CpG island 12472
Tssr20853 2 152962457 to 152962469 12 + TSS region transcription start site region 20853
Ttll9 2 152962485 to 153008482 45997 + protein coding gene tubulin tyrosine ligase-like family, member 9
Tssr20854 2 152962486 to 152962510 24 + TSS region transcription start site region 20854
Tssr20855 2 152962521 to 152962528 7 + TSS region transcription start site region 20855
Tssr20856 2 152967935 to 152967952 17 + TSS region transcription start site region 20856
Tssr20857 2 152988629 to 152988632 3 + TSS region transcription start site region 20857
Gm14199 2 152990017 to 152991631 1614 - antisense lncRNA gene predicted gene 14199
Pdrg1 2 153008890 to 153015383 6493 - protein coding gene p53 and DNA damage regulated 1
Tssr20858 2 153014585 to 153014627 42 + TSS region transcription start site region 20858
Cpgi12473 2 153014822 to 153015604 782 CpG island CpG island 12473
Tssr26880 2 153015331 to 153015398 67 - TSS region transcription start site region 26880
Cpgi12474 2 153031539 to 153032950 1411 CpG island CpG island 12474
Xkr7 2 153031852 to 153055775 23923 + protein coding gene X-linked Kx blood group related 7
Tssr20859 2 153031985 to 153032014 29 + TSS region transcription start site region 20859
Gm32286 2 153041344 to 153052799 11455 - lncRNA gene predicted gene, 32286
D2Mit284 2 153047016 to 153047212 196 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 284
D2Mit284.4 2 153047198 to 153047307 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 284.4
Tssr20860 2 153051760 to 153051783 23 + TSS region transcription start site region 20860
Cpgi12475 2 153052439 to 153053071 632 CpG island CpG island 12475
Ccm2l 2 153065955 to 153081735 15780 + protein coding gene cerebral cavernous malformation 2-like
Tssr20861 2 153065988 to 153065999 11 + TSS region transcription start site region 20861
Tssr20862 2 153069213 to 153069225 12 + TSS region transcription start site region 20862
Cpgi12476 2 153070770 to 153071125 355 CpG island CpG island 12476
Cpgi12477 2 153071312 to 153072723 1411 CpG island CpG island 12477
Cpgi12478 2 153080841 to 153081266 425 CpG island CpG island 12478
Tssr26881 2 153090640 to 153090661 21 - TSS region transcription start site region 26881
Tssr20863 2 153107656 to 153107673 17 + TSS region transcription start site region 20863
Tssr20864 2 153107702 to 153107709 7 + TSS region transcription start site region 20864
Cpgi12479 2 153108445 to 153109152 707 CpG island CpG island 12479
Hck 2 153108468 to 153151441 42973 + protein coding gene hemopoietic cell kinase
Tssr20865 2 153108474 to 153108484 10 + TSS region transcription start site region 20865
Tssr20866 2 153108489 to 153108542 53 + TSS region transcription start site region 20866
Tssr26882 2 153109018 to 153109022 4 - TSS region transcription start site region 26882
Tssr20867 2 153114476 to 153114506 30 + TSS region transcription start site region 20867
Tssr20868 2 153117608 to 153117630 22 + TSS region transcription start site region 20868
Tssr20869 2 153120363 to 153120398 35 + TSS region transcription start site region 20869