Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:152619232-152720325

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr26844 2 152622115 to 152622122 7 - TSS region transcription start site region 26844
Tssr26845 2 152622125 to 152622136 11 - TSS region transcription start site region 26845
Defb25 2 152622356 to 152623053 697 - protein coding gene defensin beta 25
Tssr26846 2 152623076 to 152623088 12 - TSS region transcription start site region 26846
Cpgi12453 2 152626613 to 152627577 964 CpG island CpG island 12453
Tssr20811 2 152626932 to 152626957 25 + TSS region transcription start site region 20811
Tssr20812 2 152626985 to 152627018 33 + TSS region transcription start site region 20812
Rem1 2 152627008 to 152635191 8183 + protein coding gene rad and gem related GTP binding protein 1
Tssr26847 2 152627266 to 152627281 15 - TSS region transcription start site region 26847
Tssr26848 2 152627330 to 152627339 9 - TSS region transcription start site region 26848
Cpgi12454 2 152633377 to 152633887 510 CpG island CpG island 12454
Cpgi12455 2 152634348 to 152634833 485 CpG island CpG island 12455
Gm31791 2 152645755 to 152649370 3615 + lncRNA gene predicted gene, 31791
D2Ertd691e 2 152650906 to 152651116 210 DNA segment DNA segment, Chr 2, ERATO Doi 691, expressed
1700030C14Rik 2 152652883 to 152654330 1447 - antisense lncRNA gene RIKEN cDNA 1700030C14 gene
Tssr26849 2 152654253 to 152654259 6 - TSS region transcription start site region 26849
Tssr26850 2 152654261 to 152654266 5 - TSS region transcription start site region 26850
Tssr26851 2 152654288 to 152654304 16 - TSS region transcription start site region 26851
Tssr26852 2 152654314 to 152654333 19 - TSS region transcription start site region 26852
Cpgi12456 2 152669232 to 152670325 1093 CpG island CpG island 12456
H13 2 152669461 to 152708670 39209 + protein coding gene histocompatibility 13
Tssr20813 2 152669462 to 152669539 77 + TSS region transcription start site region 20813
Tssr20814 2 152677571 to 152677594 23 + TSS region transcription start site region 20814
Tssr20815 2 152685288 to 152685297 9 + TSS region transcription start site region 20815
Tssr20816 2 152685312 to 152685323 11 + TSS region transcription start site region 20816
Tssr20817 2 152685330 to 152685335 5 + TSS region transcription start site region 20817
Tssr20818 2 152686115 to 152686130 15 + TSS region transcription start site region 20818
Cpgi12457 2 152686785 to 152687333 548 CpG island CpG island 12457
Tssr26853 2 152686805 to 152686815 10 - TSS region transcription start site region 26853
Tssr20819 2 152687021 to 152687041 20 + TSS region transcription start site region 20819
Tssr20820 2 152687137 to 152687158 21 + TSS region transcription start site region 20820
Mcts2 2 152687148 to 152687946 798 + protein coding gene malignant T cell amplified sequence 2
Tssr20821 2 152687163 to 152687177 14 + TSS region transcription start site region 20821
Tssr20822 2 152687178 to 152687200 22 + TSS region transcription start site region 20822
Gm26841 2 152694733 to 152696692 1959 - lincRNA gene predicted gene, 26841
Tssr20823 2 152694986 to 152695013 27 + TSS region transcription start site region 20823
Tssr20824 2 152695458 to 152695476 18 + TSS region transcription start site region 20824
Tssr20825 2 152695507 to 152695518 11 + TSS region transcription start site region 20825
Cpgi12458 2 152703803 to 152704198 395 CpG island CpG island 12458
Cpgi12459 2 152707452 to 152707942 490 CpG island CpG island 12459