Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:150673281-150825762

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vsx1 2 150680702 to 150689137 8435 - protein coding gene visual system homeobox 1
Cpgi12410 2 150688212 to 150689414 1202 CpG island CpG island 12410
Tssr26713 2 150689014 to 150689020 6 - TSS region transcription start site region 26713
Platr15 2 150704536 to 150706876 2340 - lincRNA gene pluripotency associated transcript 15
Gm28450 2 150723984 to 150724621 637 - lincRNA gene predicted gene 28450
Gm26681 2 150748281 to 150750762 2481 - lincRNA gene predicted gene, 26681
Cpgi12411 2 150748837 to 150749583 746 CpG island CpG island 12411
Tssr20707 2 150749036 to 150749147 111 + TSS region transcription start site region 20707
Entpd6 2 150749042 to 150771675 22633 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 6
Tssr20708 2 150770282 to 150770295 13 + TSS region transcription start site region 20708
Gm30141 2 150773315 to 150786625 13310 - lncRNA gene predicted gene, 30141
Cpgi12412 2 150786449 to 150787372 923 CpG island CpG island 12412
Tssr20709 2 150786740 to 150786794 54 + TSS region transcription start site region 20709
Pygb 2 150786796 to 150831748 44952 + protein coding gene brain glycogen phosphorylase
Tssr20710 2 150786806 to 150786817 11 + TSS region transcription start site region 20710
D2Mit1003 2 150810825 to 150811021 196 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1003
Tssr26714 2 150822535 to 150822577 42 - TSS region transcription start site region 26714