Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:150579042-150941675

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apmap 2 150583081 to 150608558 25477 - protein coding gene adipocyte plasma membrane associated protein
Tssr26703 2 150600341 to 150600352 11 - TSS region transcription start site region 26703
Tssr26704 2 150600354 to 150600367 13 - TSS region transcription start site region 26704
Tssr26705 2 150600374 to 150600383 9 - TSS region transcription start site region 26705
Tssr26706 2 150600397 to 150600413 16 - TSS region transcription start site region 26706
Tssr26707 2 150600415 to 150600463 48 - TSS region transcription start site region 26707
Gm14123 2 150606233 to 150610254 4021 + unclassified non-coding RNA gene predicted gene 14123
Cpgi12408 2 150607977 to 150608788 811 CpG island CpG island 12408
Tssr26708 2 150608490 to 150608501 11 - TSS region transcription start site region 26708
Tssr26709 2 150608502 to 150608561 59 - TSS region transcription start site region 26709
D2Mit261 2 150616541 to 150616652 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 261
Acss1 2 150618111 to 150668240 50129 - protein coding gene acyl-CoA synthetase short-chain family member 1
Tssr26710 2 150619347 to 150619372 25 - TSS region transcription start site region 26710
Tssr26711 2 150638095 to 150638107 12 - TSS region transcription start site region 26711
D2Dcr105 2 150641786 to 150641881 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 105
Tssr20706 2 150667385 to 150667421 36 + TSS region transcription start site region 20706
E130215H24Rik 2 150667494 to 150668932 1438 + lncRNA gene RIKEN cDNA E130215H24 gene
Cpgi12409 2 150667685 to 150668575 890 CpG island CpG island 12409
Tssr26712 2 150668198 to 150668257 59 - TSS region transcription start site region 26712
Vsx1 2 150680702 to 150689137 8435 - protein coding gene visual system homeobox 1
Cpgi12410 2 150688212 to 150689414 1202 CpG island CpG island 12410
Tssr26713 2 150689014 to 150689020 6 - TSS region transcription start site region 26713
Platr15 2 150704536 to 150706876 2340 - lincRNA gene pluripotency associated transcript 15
Gm28450 2 150723984 to 150724621 637 - lincRNA gene predicted gene 28450
Gm26681 2 150748281 to 150750762 2481 - lincRNA gene predicted gene, 26681
Cpgi12411 2 150748837 to 150749583 746 CpG island CpG island 12411
Tssr20707 2 150749036 to 150749147 111 + TSS region transcription start site region 20707
Entpd6 2 150749042 to 150771675 22633 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 6
Tssr20708 2 150770282 to 150770295 13 + TSS region transcription start site region 20708
Gm30141 2 150773315 to 150786625 13310 - lncRNA gene predicted gene, 30141
Cpgi12412 2 150786449 to 150787372 923 CpG island CpG island 12412
Tssr20709 2 150786740 to 150786794 54 + TSS region transcription start site region 20709
Pygb 2 150786796 to 150831748 44952 + protein coding gene brain glycogen phosphorylase
Tssr20710 2 150786806 to 150786817 11 + TSS region transcription start site region 20710
D2Mit1003 2 150810825 to 150811021 196 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1003
Tssr26714 2 150822535 to 150822577 42 - TSS region transcription start site region 26714
Abhd12 2 150832493 to 150904731 72238 - protein coding gene abhydrolase domain containing 12
Tssr26715 2 150837388 to 150837437 49 - TSS region transcription start site region 26715
Tssr26716 2 150840167 to 150840179 12 - TSS region transcription start site region 26716
Tssr26717 2 150842365 to 150842387 22 - TSS region transcription start site region 26717
Tssr26718 2 150842398 to 150842409 11 - TSS region transcription start site region 26718
Tssr26719 2 150855649 to 150855701 52 - TSS region transcription start site region 26719
Tssr26720 2 150855706 to 150855720 14 - TSS region transcription start site region 26720
Tssr26721 2 150855728 to 150855774 46 - TSS region transcription start site region 26721
Tssr26722 2 150855828 to 150855848 20 - TSS region transcription start site region 26722
Tssr26723 2 150855918 to 150855946 28 - TSS region transcription start site region 26723
Tssr26724 2 150855999 to 150856030 31 - TSS region transcription start site region 26724
Tssr26725 2 150856048 to 150856070 22 - TSS region transcription start site region 26725
Tssr26726 2 150856107 to 150856129 22 - TSS region transcription start site region 26726
Tssr26727 2 150856145 to 150856161 16 - TSS region transcription start site region 26727
Tssr26728 2 150858827 to 150858857 30 - TSS region transcription start site region 26728
Tssr26729 2 150858873 to 150858889 16 - TSS region transcription start site region 26729
Tssr26730 2 150875059 to 150875090 31 - TSS region transcription start site region 26730
Gm23598 2 150883723 to 150883866 143 + snoRNA gene predicted gene, 23598
Cpgi12413 2 150903874 to 150905049 1175 CpG island CpG island 12413
Tssr26731 2 150904620 to 150904748 128 - TSS region transcription start site region 26731
Cpgi12414 2 150909539 to 150909892 353 CpG island CpG island 12414
Gins1 2 150909556 to 150931280 21724 + protein coding gene GINS complex subunit 1 (Psf1 homolog)
Tssr20711 2 150909565 to 150909642 77 + TSS region transcription start site region 20711
Gm20550 2 150927280 to 150927699 419 + pseudogene predicted gene 20550
Tssr20712 2 150927286 to 150927293 7 + TSS region transcription start site region 20712
Cpgi12415 2 150933428 to 150933684 256 CpG island CpG island 12415
Gm14143 2 150933533 to 150933889 356 + pseudogene predicted gene 14143
Ninl 2 150934519 to 151009398 74879 - protein coding gene ninein-like