Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:147050817-147311269

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xrn2 2 147012996 to 147078000 65004 + protein coding gene 5'-3' exoribonuclease 2
Tssr20624 2 147072596 to 147072600 4 + TSS region transcription start site region 20624
Nkx2-4 2 147083337 to 147085439 2102 - protein coding gene NK2 homeobox 4
Cpgi12375 2 147083616 to 147085952 2336 CpG island CpG island 12375
Tssr26626 2 147085464 to 147085483 19 - TSS region transcription start site region 26626
Gm34889 2 147085506 to 147127803 42297 + lncRNA gene predicted gene, 34889
Gm14116 2 147146408 to 147147212 804 - pseudogene predicted gene 14116
Nkx2-2 2 147177546 to 147194243 16697 - protein coding gene NK2 homeobox 2
Cpgi12376 2 147178293 to 147178499 206 CpG island CpG island 12376
Cpgi12377 2 147178642 to 147179094 452 CpG island CpG island 12377
Cpgi12378 2 147180817 to 147181269 452 CpG island CpG island 12378
Cpgi12379 2 147183903 to 147184991 1088 CpG island CpG island 12379
Nkx2-2os 2 147184083 to 147331681 147598 + antisense lncRNA gene NK2 homeobox 2, opposite strand
Cpgi12380 2 147185639 to 147186500 861 CpG island CpG island 12380
Tssr26627 2 147185798 to 147185835 37 - TSS region transcription start site region 26627
Tssr26628 2 147186365 to 147186382 17 - TSS region transcription start site region 26628
Tssr26629 2 147186389 to 147186413 24 - TSS region transcription start site region 26629
Cpgi12381 2 147187395 to 147187737 342 CpG island CpG island 12381
6430503K07Rik 2 147187424 to 147188407 983 + antisense lncRNA gene RIKEN cDNA 6430503K07 gene
Cpgi12382 2 147187986 to 147188331 345 CpG island CpG island 12382
Cpgi12383 2 147190211 to 147191132 921 CpG island CpG island 12383
Cpgi12384 2 147193787 to 147195595 1808 CpG island CpG island 12384
Tssr26630 2 147194241 to 147194249 8 - TSS region transcription start site region 26630
Tssr682 2 147237389 to 147237391 2 + TSS region transcription start site region 682
Gm39955 2 147248650 to 147256877 8227 - lncRNA gene predicted gene, 39955
Gm22261 2 147250462 to 147250785 323 - unclassified non-coding RNA gene predicted gene, 22261
Tssr683 2 147275629 to 147275633 4 + TSS region transcription start site region 683
Gm14115 2 147280603 to 147281084 481 - pseudogene predicted gene 14115
Tssr26631 2 147281121 to 147281125 4 - TSS region transcription start site region 26631
Gm14113 2 147289755 to 147290730 975 + pseudogene predicted gene 14113