MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:146221946-146801979

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi12367	2	146220676 to 146223989	3313		CpG island	CpG island 12367
Insm1	2	146221997 to 146225020	3023	+	protein coding gene	insulinoma-associated 1
Tssr20610	2	146222093 to 146222111	18	+	TSS region	transcription start site region 20610
Ralgapa2	2	146239876 to 146512318	272442	-	protein coding gene	Ral GTPase activating protein, alpha subunit 2 (catalytic)
A930019D19Rik	2	146259286 to 146267160	7874	+	antisense lncRNA gene	RIKEN cDNA A930019D19 gene
Tssr26620	2	146261368 to 146261387	19	-	TSS region	transcription start site region 26620
B130033B12Rik	2	146270037 to 146271733	1696		unclassified gene	RIKEN cDNA B130033B12 gene
Gm14117	2	146305547 to 146306386	839	+	pseudogene	predicted gene 14117
9630019E01Rik	2	146401616 to 146403853	2237		unclassified gene	RIKEN cDNA 9630019E01 gene
V25Dq3	2	146500000 to 146500000	0		QTL	vitamin D inactive form serum level QTL 3
Cpgi12368	2	146511371 to 146512456	1085		CpG island	CpG island 12368
Tssr26621	2	146511946 to 146511979	33	-	TSS region	transcription start site region 26621
Tssr26622	2	146511992 to 146512015	23	-	TSS region	transcription start site region 26622
Tssr26623	2	146512026 to 146512083	57	-	TSS region	transcription start site region 26623
4933406D12Rik	2	146542931 to 146546108	3177	+	lincRNA gene	RIKEN cDNA 4933406D12 gene
Gm34689	2	146709704 to 146731545	21841	+	lncRNA gene	predicted gene, 34689
Gm14111	2	146754707 to 146755705	998	-	pseudogene	predicted gene 14111
Gm35433	2	146766632 to 146774283	7651	+	lncRNA gene	predicted gene, 35433