Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:145875678-146525724

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nktcn2 2 138895496 to 146052033 7156537 QTL natural killer T cell numbers 2
Ssrq1 2 142217381 to 146052033 3834652 QTL stress response QTL 1
Rin2 2 145771727 to 145887616 115889 + protein coding gene Ras and Rab interactor 2
Gm25026 2 145878286 to 145878473 187 + miRNA gene predicted gene, 25026
Tssr20591 2 145878827 to 145878839 12 + TSS region transcription start site region 20591
Tssr20592 2 145878871 to 145878878 7 + TSS region transcription start site region 20592
D2Dcr101 2 145879448 to 145879561 113 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 101
Gm39954 2 145880114 to 145894181 14067 - lncRNA gene predicted gene, 39954
Tssr26615 2 145884905 to 145884914 9 - TSS region transcription start site region 26615
Tssr20593 2 145886340 to 145886358 18 + TSS region transcription start site region 20593
Tssr20594 2 145886402 to 145886420 18 + TSS region transcription start site region 20594
Tssr20595 2 145886643 to 145886654 11 + TSS region transcription start site region 20595
Tssr20596 2 145886876 to 145886899 23 + TSS region transcription start site region 20596
Tssr20597 2 145886900 to 145886921 21 + TSS region transcription start site region 20597
Tssr20598 2 145886930 to 145886941 11 + TSS region transcription start site region 20598
Tssr20599 2 145887017 to 145887030 13 + TSS region transcription start site region 20599
Gm11764 2 145892091 to 145892704 613 + pseudogene predicted gene 11764
Naa20 2 145902099 to 145916425 14326 + protein coding gene N(alpha)-acetyltransferase 20, NatB catalytic subunit
Cpgi12364 2 145903030 to 145903657 627 CpG island CpG island 12364
Tssr20600 2 145903222 to 145903227 5 + TSS region transcription start site region 20600
Tssr20601 2 145903234 to 145903300 66 + TSS region transcription start site region 20601
Tssr20602 2 145903890 to 145903903 13 + TSS region transcription start site region 20602
Crnkl1 2 145917482 to 145934700 17218 - protein coding gene crooked neck pre-mRNA splicing factor 1
Cpgi12365 2 145934266 to 145935054 788 CpG island CpG island 12365
Tssr26616 2 145934682 to 145934738 56 - TSS region transcription start site region 26616
Tssr20603 2 145934776 to 145934797 21 + TSS region transcription start site region 20603
Cfap61 2 145934784 to 145964226 29442 + protein coding gene cilia and flagella associated protein 61
Tssr20604 2 145934800 to 145934813 13 + TSS region transcription start site region 20604
Tssr20605 2 146047198 to 146047242 44 + TSS region transcription start site region 20605
D2Mit280 2 146051834 to 146052033 199 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 280
Gm34629 2 146095018 to 146099616 4598 - lncRNA gene predicted gene, 34629
Tssr26617 2 146099202 to 146099221 19 - TSS region transcription start site region 26617
Tssr20606 2 146101647 to 146101654 7 + TSS region transcription start site region 20606
Tssr20607 2 146101674 to 146101679 5 + TSS region transcription start site region 20607
Tssr26618 2 146198025 to 146198036 11 - TSS region transcription start site region 26618
Tssr26619 2 146198044 to 146198057 13 - TSS region transcription start site region 26619
Tssr20608 2 146200651 to 146200660 9 + TSS region transcription start site region 20608
Tssr20609 2 146200678 to 146200724 46 + TSS region transcription start site region 20609
Cpgi12366 2 146218156 to 146218803 647 CpG island CpG island 12366
Cpgi12367 2 146220676 to 146223989 3313 CpG island CpG island 12367
Insm1 2 146221997 to 146225020 3023 + protein coding gene insulinoma-associated 1
Tssr20610 2 146222093 to 146222111 18 + TSS region transcription start site region 20610
Ralgapa2 2 146239876 to 146512318 272442 - protein coding gene Ral GTPase activating protein, alpha subunit 2 (catalytic)
A930019D19Rik 2 146259286 to 146267160 7874 + antisense lncRNA gene RIKEN cDNA A930019D19 gene
Tssr26620 2 146261368 to 146261387 19 - TSS region transcription start site region 26620
B130033B12Rik 2 146270037 to 146271733 1696 unclassified gene RIKEN cDNA B130033B12 gene
Gm14117 2 146305547 to 146306386 839 + pseudogene predicted gene 14117
9630019E01Rik 2 146401616 to 146403853 2237 unclassified gene RIKEN cDNA 9630019E01 gene
V25Dq3 2 146500000 to 146500000 0 QTL vitamin D inactive form serum level QTL 3
Cpgi12368 2 146511371 to 146512456 1085 CpG island CpG island 12368
Tssr26621 2 146511946 to 146511979 33 - TSS region transcription start site region 26621
Tssr26622 2 146511992 to 146512015 23 - TSS region transcription start site region 26622
Tssr26623 2 146512026 to 146512083 57 - TSS region transcription start site region 26623