Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:145101407-145861731

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D2Ertd397e 2 145147358 to 145147567 209 DNA segment DNA segment, Chr 2, ERATO Doi 397, expressed
Cpgi12361 2 145166859 to 145168735 1876 CpG island CpG island 12361
Tssr20554 2 145167505 to 145167520 15 + TSS region transcription start site region 20554
Tssr20555 2 145167706 to 145167773 67 + TSS region transcription start site region 20555
Slc24a3 2 145167754 to 145642166 474412 + protein coding gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
Tssr20556 2 145167846 to 145167900 54 + TSS region transcription start site region 20556
Tssr20557 2 145167904 to 145167982 78 + TSS region transcription start site region 20557
Tssr20558 2 145186409 to 145186414 5 + TSS region transcription start site region 20558
Gm14093 2 145337648 to 145379381 41733 + sense intronic lncRNA gene predicted gene 14093
Gm22731 2 145352843 to 145352936 93 + rRNA gene predicted gene, 22731
D2Ertd105e 2 145382985 to 145383184 199 DNA segment DNA segment, Chr 2, ERATO Doi 105, expressed
Tssr20559 2 145460241 to 145460246 5 + TSS region transcription start site region 20559
D2Dcr100 2 145470549 to 145470672 123 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 100
D2Mit109 2 145470552 to 145470727 175 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 109
Lith1 2 145470727 to 45457623 -100013104 QTL lithogenic gene 1
Gm22390 2 145481407 to 145481731 324 - unclassified non-coding RNA gene predicted gene, 22390
Gm11759 2 145510194 to 145510657 463 - pseudogene predicted gene 11759
Gm14092 2 145550652 to 145554982 4330 - antisense lncRNA gene predicted gene 14092
Gm19115 2 145567050 to 145567701 651 + pseudogene predicted gene, 19115
Cpgi12362 2 145674845 to 145676162 1317 CpG island CpG island 12362
Tssr20560 2 145675342 to 145675358 16 + TSS region transcription start site region 20560
Tssr20561 2 145675470 to 145675493 23 + TSS region transcription start site region 20561
Tssr20562 2 145675506 to 145675527 21 + TSS region transcription start site region 20562
BC039771 2 145701195 to 145753672 52477 + lncRNA gene cDNA sequence BC039771
Gm11763 2 145701414 to 145701725 311 - pseudogene predicted gene 11763
Tssr681 2 145707270 to 145707272 2 + TSS region transcription start site region 681
Gm34570 2 145711215 to 145712448 1233 - lncRNA gene predicted gene, 34570
Gm34513 2 145713298 to 145725398 12100 - lncRNA gene predicted gene, 34513
Tssr20563 2 145731060 to 145731064 4 + TSS region transcription start site region 20563
Rin2 2 145771727 to 145887616 115889 + protein coding gene Ras and Rab interactor 2
Tssr20564 2 145786122 to 145786152 30 + TSS region transcription start site region 20564
Tssr20565 2 145786260 to 145786274 14 + TSS region transcription start site region 20565
Tssr20566 2 145786279 to 145786307 28 + TSS region transcription start site region 20566
Tssr20567 2 145786324 to 145786335 11 + TSS region transcription start site region 20567
Tssr20568 2 145820002 to 145820005 3 + TSS region transcription start site region 20568
Tssr20569 2 145822142 to 145822157 15 + TSS region transcription start site region 20569
Tssr20570 2 145822185 to 145822196 11 + TSS region transcription start site region 20570
Tssr20571 2 145822253 to 145822303 50 + TSS region transcription start site region 20571
Tssr20572 2 145822550 to 145822612 62 + TSS region transcription start site region 20572
Tssr20573 2 145830886 to 145830900 14 + TSS region transcription start site region 20573
Tssr20574 2 145851026 to 145851040 14 + TSS region transcription start site region 20574
Tssr20575 2 145851119 to 145851124 5 + TSS region transcription start site region 20575
Tssr20576 2 145858440 to 145858463 23 + TSS region transcription start site region 20576
Tssr20577 2 145860034 to 145860057 23 + TSS region transcription start site region 20577
Tssr20578 2 145860141 to 145860156 15 + TSS region transcription start site region 20578
Tssr20579 2 145860161 to 145860175 14 + TSS region transcription start site region 20579
Tssr20580 2 145860232 to 145860246 14 + TSS region transcription start site region 20580
Cpgi12363 2 145860233 to 145861020 787 CpG island CpG island 12363
Tssr20581 2 145860353 to 145860368 15 + TSS region transcription start site region 20581
Tssr20582 2 145860485 to 145860521 36 + TSS region transcription start site region 20582
Tssr20583 2 145860653 to 145860699 46 + TSS region transcription start site region 20583
Tssr20584 2 145860702 to 145860725 23 + TSS region transcription start site region 20584
Tssr20585 2 145860734 to 145860747 13 + TSS region transcription start site region 20585
Tssr20586 2 145860760 to 145860763 3 + TSS region transcription start site region 20586
Tssr20587 2 145860879 to 145860886 7 + TSS region transcription start site region 20587
Tssr20588 2 145860891 to 145860904 13 + TSS region transcription start site region 20588
Tssr20589 2 145860916 to 145860925 9 + TSS region transcription start site region 20589