Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:144263458-144363580

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snx5 2 144250123 to 144270902 20779 - protein coding gene sorting nexin 5
Snord17 2 144265982 to 144266202 220 - snoRNA gene small nucleolar RNA, C/D box 17
Tssr20523 2 144266077 to 144266095 18 + TSS region transcription start site region 20523
Tssr26593 2 144266186 to 144266218 32 - TSS region transcription start site region 26593
Tssr26594 2 144270066 to 144270068 2 - TSS region transcription start site region 26594
Cpgi12351 2 144270116 to 144271365 1249 CpG island CpG island 12351
Tssr26595 2 144270440 to 144270486 46 - TSS region transcription start site region 26595
Tssr26596 2 144270504 to 144270533 29 - TSS region transcription start site region 26596
Tssr20524 2 144270574 to 144270591 17 + TSS region transcription start site region 20524
Tssr20525 2 144270622 to 144270672 50 + TSS region transcription start site region 20525
Tssr26597 2 144270780 to 144270800 20 - TSS region transcription start site region 26597
Tssr26598 2 144270836 to 144270847 11 - TSS region transcription start site region 26598
Tssr26599 2 144270852 to 144270863 11 - TSS region transcription start site region 26599
Mgme1 2 144270856 to 144281232 10376 + protein coding gene mitochondrial genome maintenance exonuclease 1
Tssr20526 2 144270878 to 144270949 71 + TSS region transcription start site region 20526
Tssr20527 2 144271011 to 144271055 44 + TSS region transcription start site region 20527
Tssr20528 2 144271628 to 144271633 5 + TSS region transcription start site region 20528
Ovol2 2 144305175 to 144332080 26905 - protein coding gene ovo like zinc finger 2
D2Mit491 2 144313458 to 144313580 122 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 491
D2Dcr97 2 144313468 to 144313563 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 97
Cpgi12352 2 144330364 to 144332263 1899 CpG island CpG island 12352
Tssr26600 2 144330770 to 144330781 11 - TSS region transcription start site region 26600
Tssr26601 2 144331355 to 144331367 12 - TSS region transcription start site region 26601
Tssr26602 2 144331371 to 144331392 21 - TSS region transcription start site region 26602
Tssr26603 2 144331408 to 144331414 6 - TSS region transcription start site region 26603
Tssr678 2 144331440 to 144331445 5 + TSS region transcription start site region 678
Tssr679 2 144331451 to 144331454 3 + TSS region transcription start site region 679
1700108N11Rik 2 144331459 to 144332639 1180 + antisense lncRNA gene RIKEN cDNA 1700108N11 gene
Tssr20529 2 144331478 to 144331483 5 + TSS region transcription start site region 20529
Tssr20530 2 144331486 to 144331560 74 + TSS region transcription start site region 20530
Cpgi12353 2 144333047 to 144333516 469 CpG island CpG island 12353
Gm34181 2 144337403 to 144344310 6907 + lncRNA gene predicted gene, 34181
Tssr20531 2 144337436 to 144337445 9 + TSS region transcription start site region 20531
Tssr20532 2 144337813 to 144337832 19 + TSS region transcription start site region 20532
Gm11700 2 144355917 to 144356319 402 + pseudogene predicted gene 11700