MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:144240592-144270606

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930444E06Rik	2	144243241 to 144244849	1608	+	antisense lncRNA gene	RIKEN cDNA 4930444E06 gene
Snx5	2	144250123 to 144270902	20779	-	protein coding gene	sorting nexin 5
Tssr26587	2	144253743 to 144253764	21	-	TSS region	transcription start site region 26587
Tssr26588	2	144254757 to 144254789	32	-	TSS region	transcription start site region 26588
Tssr26589	2	144255394 to 144255412	18	-	TSS region	transcription start site region 26589
Tssr26590	2	144255592 to 144255606	14	-	TSS region	transcription start site region 26590
Tssr26591	2	144257130 to 144257159	29	-	TSS region	transcription start site region 26591
Tssr26592	2	144260677 to 144260680	3	-	TSS region	transcription start site region 26592
Gm11688	2	144261234 to 144261541	307	-	pseudogene	predicted gene 11688
Gm26165	2	144261589 to 144261726	137	-	snoRNA gene	predicted gene, 26165
Snord17	2	144265982 to 144266202	220	-	snoRNA gene	small nucleolar RNA, C/D box 17
Tssr20523	2	144266077 to 144266095	18	+	TSS region	transcription start site region 20523
Tssr26593	2	144266186 to 144266218	32	-	TSS region	transcription start site region 26593
Tssr26594	2	144270066 to 144270068	2	-	TSS region	transcription start site region 26594
Cpgi12351	2	144270116 to 144271365	1249		CpG island	CpG island 12351
Tssr26595	2	144270440 to 144270486	46	-	TSS region	transcription start site region 26595
Tssr26596	2	144270504 to 144270533	29	-	TSS region	transcription start site region 26596
Tssr20524	2	144270574 to 144270591	17	+	TSS region	transcription start site region 20524