Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:144009929-144200033

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrbp1 2 143947395 to 144011263 63868 - protein coding gene ribosome binding protein 1
Cpgi12349 2 144009767 to 144011735 1968 CpG island CpG island 12349
Tssr26584 2 144010810 to 144010883 73 - TSS region transcription start site region 26584
Tssr26585 2 144011172 to 144011197 25 - TSS region transcription start site region 26585
Tssr26586 2 144011202 to 144011236 34 - TSS region transcription start site region 26586
Tssr20517 2 144033062 to 144033067 5 + TSS region transcription start site region 20517
Tssr20518 2 144033077 to 144033110 33 + TSS region transcription start site region 20518
Banf2 2 144033102 to 144073979 40877 + protein coding gene barrier to autointegration factor 2
Tssr20519 2 144033111 to 144033123 12 + TSS region transcription start site region 20519
Tssr20520 2 144033127 to 144033134 7 + TSS region transcription start site region 20520
D2Dcr91 2 144037430 to 144037525 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 91
Banf2os 2 144059138 to 144068806 9668 - antisense lncRNA gene barrier to autointegration factor 2, opposite strand
D2Dcr92 2 144104929 to 144105033 104 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 92
D2Dcr93 2 144105023 to 144105120 97 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 93
Tssr20521 2 144116178 to 144116189 11 + TSS region transcription start site region 20521
Tssr677 2 144116203 to 144116222 19 + TSS region transcription start site region 677
Gm11687 2 144142488 to 144143373 885 - pseudogene predicted gene 11687
D2Dcr94 2 144159438 to 144159528 90 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 94
Cpgi12350 2 144165455 to 144165886 431 CpG island CpG island 12350
Tssr20522 2 144165499 to 144165514 15 + TSS region transcription start site region 20522
Gm5535 2 144173150 to 144189290 16140 - lincRNA gene predicted gene 5535
D2Dcr95 2 144181998 to 144182149 151 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 95