Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:143567583-143969186

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcsk2 2 143546156 to 143816285 270129 + protein coding gene proprotein convertase subtilisin/kexin type 2
D2Dcr122 2 143590803 to 143590898 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 122
D2Dcr123 2 143593006 to 143593104 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 123
Tssr676 2 143696655 to 143696659 4 + TSS region transcription start site region 676
Pcsk2os2 2 143747583 to 143789186 41603 - antisense lncRNA gene proprotein convertase subtilisin/kexin type 2, opposite strand 2
Bfsp1 2 143826528 to 143863173 36645 - protein coding gene beaded filament structural protein 1, in lens-CP94
Tssr20507 2 143855614 to 143855620 6 + TSS region transcription start site region 20507
Rps13-ps6 2 143855649 to 143856076 427 + pseudogene ribosomal protein S13, pseudogene 6
Tssr26568 2 143860470 to 143860479 9 - TSS region transcription start site region 26568
Cpgi12347 2 143862304 to 143863230 926 CpG island CpG island 12347
Tssr26569 2 143862933 to 143862950 17 - TSS region transcription start site region 26569
Gm33648 2 143863279 to 143872816 9537 + lncRNA gene predicted gene, 33648
Gm11673 2 143877949 to 143878279 330 + pseudogene predicted gene 11673
Gm11686 2 143881177 to 143881509 332 + pseudogene predicted gene 11686
Tssr20508 2 143912527 to 143912531 4 + TSS region transcription start site region 20508
Cpgi12348 2 143914807 to 143916045 1238 CpG island CpG island 12348
Tssr20509 2 143915273 to 143915337 64 + TSS region transcription start site region 20509
Dstn 2 143915331 to 143943324 27993 + protein coding gene destrin
Tssr20510 2 143915503 to 143915535 32 + TSS region transcription start site region 20510
Tssr20511 2 143915541 to 143915568 27 + TSS region transcription start site region 20511
Tssr20512 2 143919206 to 143919211 5 + TSS region transcription start site region 20512
D2Dcr90 2 143931519 to 143931628 109 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 90
Gnf1 2 143931525 to 169276004 25344479 QTL growth and fatness 1
Bsbob 2 143931525 to 165823099 21891574 QTL BSB obesity
D2Mit194 2 143931525 to 143931638 113 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 194
Wg2d 2 143931525 to 160461088 16529563 QTL weight gain in high growth mice 2d
Tssr20513 2 143936253 to 143936257 4 + TSS region transcription start site region 20513
Tssr20514 2 143938545 to 143938589 44 + TSS region transcription start site region 20514
Gm33804 2 143940035 to 143940712 677 + lncRNA gene predicted gene, 33804
Rrbp1 2 143947395 to 144011263 63868 - protein coding gene ribosome binding protein 1
Tssr26570 2 143948427 to 143948444 17 - TSS region transcription start site region 26570
Tssr26571 2 143952265 to 143952281 16 - TSS region transcription start site region 26571