Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:143186218-143906231

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr675 2 143282775 to 143282776 1 + TSS region transcription start site region 675
Gm11644 2 143349512 to 143349661 149 + pseudogene predicted gene 11644
Tssr20504 2 143368736 to 143368738 2 + TSS region transcription start site region 20504
D2Dcr121 2 143369776 to 143369884 108 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 121
D2Mit513 2 143412744 to 143412888 144 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-513
Gm33599 2 143420619 to 143487158 66539 - lncRNA gene predicted gene, 33599
Gm11645 2 143506411 to 143507059 648 - pseudogene predicted gene 11645
Pcsk2os1 2 143535476 to 143547837 12361 - antisense lncRNA gene proprotein convertase subtilisin/kexin type 2, opposite strand 1
Cpgi12344 2 143545523 to 143546577 1054 CpG island CpG island 12344
Tssr20505 2 143546144 to 143546215 71 + TSS region transcription start site region 20505
Pcsk2 2 143546156 to 143816285 270129 + protein coding gene proprotein convertase subtilisin/kexin type 2
Tssr20506 2 143546218 to 143546231 13 + TSS region transcription start site region 20506
Cpgi12345 2 143546947 to 143547259 312 CpG island CpG island 12345
Cpgi12346 2 143547632 to 143548133 501 CpG island CpG island 12346
D2Dcr122 2 143590803 to 143590898 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 122
D2Dcr123 2 143593006 to 143593104 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 123
Tssr676 2 143696655 to 143696659 4 + TSS region transcription start site region 676
Pcsk2os2 2 143747583 to 143789186 41603 - antisense lncRNA gene proprotein convertase subtilisin/kexin type 2, opposite strand 2
Bfsp1 2 143826528 to 143863173 36645 - protein coding gene beaded filament structural protein 1, in lens-CP94
Tssr20507 2 143855614 to 143855620 6 + TSS region transcription start site region 20507
Rps13-ps6 2 143855649 to 143856076 427 + pseudogene ribosomal protein S13, pseudogene 6
Tssr26568 2 143860470 to 143860479 9 - TSS region transcription start site region 26568
Cpgi12347 2 143862304 to 143863230 926 CpG island CpG island 12347
Tssr26569 2 143862933 to 143862950 17 - TSS region transcription start site region 26569
Gm33648 2 143863279 to 143872816 9537 + lncRNA gene predicted gene, 33648
Gm11673 2 143877949 to 143878279 330 + pseudogene predicted gene 11673
Gm11686 2 143881177 to 143881509 332 + pseudogene predicted gene 11686