Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:14289212-14919241

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrc1 2 14229414 to 14332023 102609 + protein coding gene mannose receptor, C type 1
Tssr16251 2 14293503 to 14293514 11 + TSS region transcription start site region 16251
Tssr16252 2 14294813 to 14294826 13 + TSS region transcription start site region 16252
Tssr16253 2 14294862 to 14294880 18 + TSS region transcription start site region 16253
Tssr16254 2 14305333 to 14305354 21 + TSS region transcription start site region 16254
Tssr16255 2 14307036 to 14307039 3 + TSS region transcription start site region 16255
Tssr16256 2 14310899 to 14310905 6 + TSS region transcription start site region 16256
Tssr16257 2 14314280 to 14314300 20 + TSS region transcription start site region 16257
Tssr16258 2 14314428 to 14314449 21 + TSS region transcription start site region 16258
Tssr16259 2 14315348 to 14315361 13 + TSS region transcription start site region 16259
Tssr16260 2 14316180 to 14316193 13 + TSS region transcription start site region 16260
Tssr16261 2 14331063 to 14331081 18 + TSS region transcription start site region 16261
Tssr16262 2 14331109 to 14331131 22 + TSS region transcription start site region 16262
Tssr16263 2 14331135 to 14331196 61 + TSS region transcription start site region 16263
Tssr16264 2 14331371 to 14331382 11 + TSS region transcription start site region 16264
Tssr16265 2 14331429 to 14331451 22 + TSS region transcription start site region 16265
Tssr16266 2 14331456 to 14331480 24 + TSS region transcription start site region 16266
Tssr16267 2 14331496 to 14331518 22 + TSS region transcription start site region 16267
Tssr16268 2 14341887 to 14341894 7 + TSS region transcription start site region 16268
Gm37697 2 14345677 to 14347520 1843 + unclassified gene predicted gene, 37697
Slc39a12 2 14388316 to 14494977 106661 + protein coding gene solute carrier family 39 (zinc transporter), member 12
Tssr16269 2 14388390 to 14388420 30 + TSS region transcription start site region 16269
Tssr16270 2 14388434 to 14388451 17 + TSS region transcription start site region 16270
D2Ucl2 2 14428328 to 14428816 488 DNA segment DNA segment, Chr 2, University College London 2
C030041M11Rik 2 14483089 to 14483820 731 unclassified gene RIKEN cDNA C030041M11 gene
Gm13266 2 14512591 to 14542811 30220 + lncRNA gene predicted gene 13266
Tssr408 2 14512591 to 14512594 3 + TSS region transcription start site region 408
D2Mit317 2 14598379 to 14598623 244 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 317
Gm32741 2 14598741 to 14603664 4923 - lncRNA gene predicted gene, 32741
Cpgi11219 2 14603764 to 14605175 1411 CpG island CpG island 11219
Tssr16271 2 14603826 to 14603859 33 + TSS region transcription start site region 16271
Gm10849 2 14603990 to 14604611 621 - pseudogene predicted gene 10849
Cacnb2 2 14604053 to 14988811 384758 + protein coding gene calcium channel, voltage-dependent, beta 2 subunit
Tssr16272 2 14604200 to 14604203 3 + TSS region transcription start site region 16272
Tssr16273 2 14604212 to 14604241 29 + TSS region transcription start site region 16273
Tssr16274 2 14604252 to 14604271 19 + TSS region transcription start site region 16274
Gm38105 2 14611217 to 14613837 2620 + unclassified gene predicted gene, 38105
Gm13268 2 14626889 to 14627321 432 - pseudogene predicted gene 13268
Gm13312 2 14672255 to 14672972 717 + pseudogene predicted gene 13312
2900092N22Rik 2 14673404 to 14674812 1408 + unclassified gene RIKEN cDNA 2900092N22 gene
Gm13314 2 14691394 to 14691728 334 - pseudogene predicted gene 13314
Gm13311 2 14692871 to 14693249 378 - pseudogene predicted gene 13311
2900072G11Rik 2 14703152 to 14704716 1564 unclassified gene RIKEN cDNA 2900072G11 gene
Gm10848 2 14706834 to 14739722 32888 - antisense lncRNA gene predicted gene 10848
Gm37006 2 14707665 to 14710338 2673 + unclassified gene predicted gene, 37006
Gm13315 2 14721134 to 14722124 990 + pseudogene predicted gene 13315
Gm38273 2 14735546 to 14737927 2381 - unclassified gene predicted gene, 38273
Tssr16275 2 14739219 to 14739242 23 + TSS region transcription start site region 16275
Tssr16276 2 14739250 to 14739290 40 + TSS region transcription start site region 16276
Cpgi11220 2 14739552 to 14739843 291 CpG island CpG island 11220
Tssr22733 2 14739928 to 14739956 28 - TSS region transcription start site region 22733
Gm13269 2 14740372 to 14767024 26652 - antisense lncRNA gene predicted gene 13269
D2Mit360 2 14762038 to 14762124 86 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 360
Tssr16277 2 14763112 to 14763142 30 + TSS region transcription start site region 16277
Tssr16278 2 14763146 to 14763158 12 + TSS region transcription start site region 16278
Tssr16279 2 14763249 to 14763259 10 + TSS region transcription start site region 16279
Tssr16280 2 14763445 to 14763457 12 + TSS region transcription start site region 16280
Gm13316 2 14811848 to 14812538 690 - pseudogene predicted gene 13316
Tssr22734 2 14823907 to 14823927 20 - TSS region transcription start site region 22734
Tssr16281 2 14824014 to 14824027 13 + TSS region transcription start site region 16281
Tssr16282 2 14824044 to 14824047 3 + TSS region transcription start site region 16282
Tssr16283 2 14824062 to 14824072 10 + TSS region transcription start site region 16283
Tssr16284 2 14824077 to 14824088 11 + TSS region transcription start site region 16284
Tssr16285 2 14824095 to 14824119 24 + TSS region transcription start site region 16285
Tssr16286 2 14824125 to 14824136 11 + TSS region transcription start site region 16286
Tssr16287 2 14824172 to 14824185 13 + TSS region transcription start site region 16287
Tssr16288 2 14873698 to 14873708 10 + TSS region transcription start site region 16288
C030011G24Rik 2 14886695 to 14888134 1439 unclassified gene RIKEN cDNA C030011G24 gene
Tssr16289 2 14914242 to 14914251 9 + TSS region transcription start site region 16289