Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:142848492-143311700

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif16b 2 142618340 to 142901594 283254 - protein coding gene kinesin family member 16B
Tssr26562 2 142879585 to 142879604 19 - TSS region transcription start site region 26562
Tssr26563 2 142879625 to 142879636 11 - TSS region transcription start site region 26563
Cpgi12341 2 142901027 to 142901899 872 CpG island CpG island 12341
Tssr26564 2 142901434 to 142901474 40 - TSS region transcription start site region 26564
Tssr26565 2 142901506 to 142901576 70 - TSS region transcription start site region 26565
Cpgi12342 2 142902931 to 142903283 352 CpG island CpG island 12342
Tssr20500 2 142902965 to 142902976 11 + TSS region transcription start site region 20500
Kif16bos 2 142902965 to 142903572 607 + antisense lncRNA gene kinesin family member 16B, opposite strand
D2Dcr89 2 142938798 to 142938924 126 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 89
Cpgi12343 2 143062824 to 143063618 794 CpG island CpG island 12343
Tssr20501 2 143063031 to 143063077 46 + TSS region transcription start site region 20501
Snrpb2 2 143063069 to 143072052 8983 + protein coding gene U2 small nuclear ribonucleoprotein B
Tssr20502 2 143071498 to 143071515 17 + TSS region transcription start site region 20502
Tssr20503 2 143078467 to 143078482 15 + TSS region transcription start site region 20503
Otor 2 143078492 to 143081700 3208 + protein coding gene otoraplin
Tssr674 2 143080013 to 143080021 8 - TSS region transcription start site region 674
Tssr26566 2 143081229 to 143081246 17 - TSS region transcription start site region 26566
Tssr26567 2 143081688 to 143081712 24 - TSS region transcription start site region 26567
D2Dcr120 2 143118491 to 143118587 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 120
Gm14083 2 143129720 to 143130339 619 - pseudogene predicted gene 14083
Gm14082 2 143150830 to 143151630 800 - pseudogene predicted gene 14082
D2Mit137 2 143174494 to 143174581 87 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 137
Tssr675 2 143282775 to 143282776 1 + TSS region transcription start site region 675