Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:140576059-141336071

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr20483 2 140589531 to 140589537 6 + TSS region transcription start site region 20483
Tssr26547 2 140592374 to 140592375 1 - TSS region transcription start site region 26547
Tssr20484 2 140598485 to 140598496 11 + TSS region transcription start site region 20484
Gm39948 2 140634204 to 140645746 11542 + lncRNA gene predicted gene, 39948
Flrt3 2 140658198 to 140671476 13278 - protein coding gene fibronectin leucine rich transmembrane protein 3
Tssr26548 2 140659688 to 140659715 27 - TSS region transcription start site region 26548
Tssr26549 2 140660368 to 140660388 20 - TSS region transcription start site region 26549
Cpgi12340 2 140671348 to 140671510 162 CpG island CpG island 12340
Tssr673 2 140671380 to 140671387 7 - TSS region transcription start site region 673
Tssr26550 2 140671406 to 140671427 21 - TSS region transcription start site region 26550
Tssr26551 2 140671428 to 140671439 11 - TSS region transcription start site region 26551
Tssr26552 2 140671440 to 140671458 18 - TSS region transcription start site region 26552
Tssr26553 2 140671462 to 140671476 14 - TSS region transcription start site region 26553
Tssr26554 2 140773552 to 140773555 3 - TSS region transcription start site region 26554
Tssr20485 2 140783689 to 140783702 13 + TSS region transcription start site region 20485
Tssr26555 2 140790432 to 140790449 17 - TSS region transcription start site region 26555
Calr-ps 2 140955765 to 140956249 484 - pseudogene calreticulin, pseudogene
Tssr26556 2 140955957 to 140955986 29 - TSS region transcription start site region 26556
Tssr26557 2 140956059 to 140956071 12 - TSS region transcription start site region 26557
Tssr20486 2 140965927 to 140965946 19 + TSS region transcription start site region 20486
D2Dcr85 2 141008401 to 141008513 112 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 85
D2Dcr86 2 141019932 to 141020027 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 86
Pgia2 2 141095391 to 141095504 113 QTL proteoglycan induced arthritis 2
D2Mit166 2 141095391 to 141095504 113 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 166
Zcchc9-ps 2 141127280 to 141128062 782 + pseudogene zinc finger, CCHC domain containing 9, pseudogene
2900060K15Rik 2 141175069 to 141176396 1327 unclassified gene RIKEN cDNA 2900060K15 gene
Tssr20487 2 141179999 to 141180006 7 + TSS region transcription start site region 20487
Tssr20488 2 141182898 to 141182900 2 + TSS region transcription start site region 20488
Macrod2os2 2 141229670 to 141235426 5756 - antisense lncRNA gene MACRO domain containing 2, opposite strand 2
Macrod2os1 2 141230431 to 141286991 56560 - antisense lncRNA gene MACRO domain containing 2, opposite strand 1