Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:139527701-139827720

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12 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sptlc3 2 139493913 to 139637674 143761 + protein coding gene serine palmitoyltransferase, long chain base subunit 3
Tssr20470 2 139546017 to 139546020 3 + TSS region transcription start site region 20470
Tssr20471 2 139579468 to 139579478 10 + TSS region transcription start site region 20471
Gm27385 2 139588227 to 139588330 103 + snRNA gene predicted gene, 27385
Tssr20472 2 139601218 to 139601221 3 + TSS region transcription start site region 20472
3021401L19Rik 2 139673240 to 139675390 2150 unclassified gene RIKEN cDNA 3021401L19 gene
Cpgi12335 2 139677027 to 139679191 2164 CpG island CpG island 12335
Tssr20473 2 139677177 to 139677194 17 + TSS region transcription start site region 20473
Tssr20474 2 139677701 to 139677720 19 + TSS region transcription start site region 20474
Ism1 2 139678178 to 139758581 80403 + protein coding gene isthmin 1, angiogenesis inhibitor
Tssr20475 2 139678637 to 139678680 43 + TSS region transcription start site region 20475
Cpgi12336 2 139745821 to 139746031 210 CpG island CpG island 12336