Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:138326619-139506932

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btbd3 2 138256565 to 138589292 332727 + protein coding gene BTB (POZ) domain containing 3
Tssr20460 2 138365622 to 138365631 9 + TSS region transcription start site region 20460
Gm40022 2 138517959 to 138523711 5752 + pseudogene predicted gene, 40022
Gm14061 2 138589392 to 138649122 59730 + lincRNA gene predicted gene 14061
D2Mit209 2 138700655 to 138700775 120 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 209
D2Mit209.2 2 138700750 to 138700863 113 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 209.2
Tssr20461 2 138714629 to 138714640 11 + TSS region transcription start site region 20461
Mir1952 2 138819929 to 138820007 78 + miRNA gene microRNA 1952
Gm14065 2 138872023 to 138872607 584 + pseudogene predicted gene 14065
Nktcn2 2 138895496 to 146052033 7156537 QTL natural killer T cell numbers 2
D2Mit490 2 138895496 to 138895600 104 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 490
Gm14067 2 138916619 to 138916932 313 - pseudogene predicted gene 14067
Gm14069 2 139175897 to 139176125 228 - pseudogene predicted gene 14069
Gm14066 2 139256344 to 139306924 50580 - unclassified non-coding RNA gene predicted gene 14066
Gm14071 2 139383832 to 139384340 508 - pseudogene predicted gene 14071
D2Mit339 2 139444611 to 139444750 139 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 339
Sptlc3 2 139493913 to 139637674 143761 + protein coding gene serine palmitoyltransferase, long chain base subunit 3
Tssr20462 2 139493914 to 139493923 9 + TSS region transcription start site region 20462
Tssr20463 2 139493932 to 139493937 5 + TSS region transcription start site region 20463
Tssr20464 2 139493954 to 139493972 18 + TSS region transcription start site region 20464
Tssr20465 2 139493976 to 139494015 39 + TSS region transcription start site region 20465
Tssr20466 2 139494038 to 139494050 12 + TSS region transcription start site region 20466
Tssr20467 2 139494053 to 139494063 10 + TSS region transcription start site region 20467
Tssr20468 2 139494118 to 139494175 57 + TSS region transcription start site region 20468
Tssr20469 2 139494192 to 139494197 5 + TSS region transcription start site region 20469