Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:138254392-138984122

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12333 2 138256467 to 138257349 882 CpG island CpG island 12333
Tssr20455 2 138256530 to 138256615 85 + TSS region transcription start site region 20455
Btbd3 2 138256565 to 138589292 332727 + protein coding gene BTB (POZ) domain containing 3
Tssr20456 2 138256617 to 138256677 60 + TSS region transcription start site region 20456
Tssr20457 2 138278396 to 138278407 11 + TSS region transcription start site region 20457
Tssr20458 2 138278469 to 138278480 11 + TSS region transcription start site region 20458
Tssr20459 2 138278481 to 138278531 50 + TSS region transcription start site region 20459
Tssr672 2 138279049 to 138279061 12 + TSS region transcription start site region 672
Cpgi12334 2 138280311 to 138280485 174 CpG island CpG island 12334
D2Mit353 2 138299435 to 138299634 199 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 353
Tssr20460 2 138365622 to 138365631 9 + TSS region transcription start site region 20460
Gm40022 2 138517959 to 138523711 5752 + pseudogene predicted gene, 40022
Gm14061 2 138589392 to 138649122 59730 + lincRNA gene predicted gene 14061
D2Mit209 2 138700655 to 138700775 120 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 209
D2Mit209.2 2 138700750 to 138700863 113 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 209.2
Tssr20461 2 138714629 to 138714640 11 + TSS region transcription start site region 20461
Mir1952 2 138819929 to 138820007 78 + miRNA gene microRNA 1952
Gm14065 2 138872023 to 138872607 584 + pseudogene predicted gene 14065
Nktcn2 2 138895496 to 146052033 7156537 QTL natural killer T cell numbers 2
D2Mit490 2 138895496 to 138895600 104 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 490
Gm14067 2 138916619 to 138916932 313 - pseudogene predicted gene 14067