Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13743583-14803588

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114 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St8sia6 2 13651021 to 13794064 143043 - protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Cpgi11216 2 13792760 to 13794163 1403 CpG island CpG island 11216
Tssr22720 2 13793031 to 13793036 5 - TSS region transcription start site region 22720
Tssr22721 2 13793728 to 13793753 25 - TSS region transcription start site region 22721
Tssr22722 2 13793793 to 13793806 13 - TSS region transcription start site region 22722
Tssr22723 2 13793817 to 13793879 62 - TSS region transcription start site region 22723
Tssr22724 2 13793911 to 13793920 9 - TSS region transcription start site region 22724
Tssr22725 2 13794013 to 13794025 12 - TSS region transcription start site region 22725
Tssr22726 2 13794032 to 13794041 9 - TSS region transcription start site region 22726
Tssr16222 2 13878952 to 13878958 6 + TSS region transcription start site region 16222
D930036K23Rik 2 14016086 to 14020049 3963 - unclassified gene RIKEN cDNA D930036K23 gene
5730447C08Rik 2 14020977 to 14021395 418 unclassified gene RIKEN cDNA 5730447C08 gene
D2Bwg0405e 2 14023789 to 14023952 163 DNA segment DNA segment, Chr 2, Brigham & Women's Genetics 0405 expressed
Hacd1 2 14026829 to 14056035 29206 - protein coding gene 3-hydroxyacyl-CoA dehydratase 1
Gm37894 2 14037825 to 14040423 2598 - unclassified gene predicted gene, 37894
Cpgi11217 2 14054913 to 14056485 1572 CpG island CpG island 11217
Tssr22727 2 14055890 to 14055917 27 - TSS region transcription start site region 22727
Tssr22728 2 14055929 to 14055956 27 - TSS region transcription start site region 22728
Tssr22729 2 14055963 to 14056022 59 - TSS region transcription start site region 22729
Tssr22730 2 14056029 to 14056044 15 - TSS region transcription start site region 22730
Tssr22731 2 14059899 to 14059915 16 - TSS region transcription start site region 22731
Stamos 2 14070333 to 14073934 3601 - lncRNA gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand
Cpgi11218 2 14073507 to 14074701 1194 CpG island CpG island 11218
Tssr16223 2 14073607 to 14073625 18 + TSS region transcription start site region 16223
Tssr16224 2 14073629 to 14073672 43 + TSS region transcription start site region 16224
Stam 2 14073654 to 14148338 74684 + protein coding gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Tssr22732 2 14073851 to 14073867 16 - TSS region transcription start site region 22732
Tssr16225 2 14074091 to 14074146 55 + TSS region transcription start site region 16225
Tssr16226 2 14074147 to 14074191 44 + TSS region transcription start site region 16226
Tssr16227 2 14074218 to 14074235 17 + TSS region transcription start site region 16227
Tssr16228 2 14130842 to 14130853 11 + TSS region transcription start site region 16228
Gm37499 2 14149820 to 14153297 3477 + unclassified gene predicted gene, 37499
Tssr16229 2 14174492 to 14174509 17 + TSS region transcription start site region 16229
Tssr16230 2 14174513 to 14174546 33 + TSS region transcription start site region 16230
Tmem236 2 14174524 to 14221993 47469 + protein coding gene transmembrane protein 236
Tssr16231 2 14174550 to 14174564 14 + TSS region transcription start site region 16231
Gm13320 2 14189623 to 14189763 140 - pseudogene predicted gene 13320
Tssr16232 2 14201548 to 14201551 3 + TSS region transcription start site region 16232
Tssr16233 2 14229390 to 14229404 14 + TSS region transcription start site region 16233
Mrc1 2 14229414 to 14332023 102609 + protein coding gene mannose receptor, C type 1
Tssr16234 2 14247543 to 14247564 21 + TSS region transcription start site region 16234
Tssr16235 2 14258620 to 14258664 44 + TSS region transcription start site region 16235
Mir511 2 14261003 to 14261081 78 + miRNA gene microRNA 511
Tssr16236 2 14261176 to 14261226 50 + TSS region transcription start site region 16236
Tssr16237 2 14263308 to 14263321 13 + TSS region transcription start site region 16237
Tssr16238 2 14263394 to 14263409 15 + TSS region transcription start site region 16238
Tssr16239 2 14266497 to 14266509 12 + TSS region transcription start site region 16239
Tssr16240 2 14271698 to 14271709 11 + TSS region transcription start site region 16240
Tssr16241 2 14273462 to 14273466 4 + TSS region transcription start site region 16241
Tssr16242 2 14273504 to 14273533 29 + TSS region transcription start site region 16242
Tssr16243 2 14273583 to 14273588 5 + TSS region transcription start site region 16243
Tssr16244 2 14276278 to 14276288 10 + TSS region transcription start site region 16244
Tssr16245 2 14276296 to 14276317 21 + TSS region transcription start site region 16245
Tssr16246 2 14278921 to 14278926 5 + TSS region transcription start site region 16246
Tssr16247 2 14279576 to 14279585 9 + TSS region transcription start site region 16247
Tssr16248 2 14282142 to 14282190 48 + TSS region transcription start site region 16248
Tssr16249 2 14289084 to 14289104 20 + TSS region transcription start site region 16249
Tssr16250 2 14289149 to 14289160 11 + TSS region transcription start site region 16250
Tssr16251 2 14293503 to 14293514 11 + TSS region transcription start site region 16251
Tssr16252 2 14294813 to 14294826 13 + TSS region transcription start site region 16252
Tssr16253 2 14294862 to 14294880 18 + TSS region transcription start site region 16253
Tssr16254 2 14305333 to 14305354 21 + TSS region transcription start site region 16254
Tssr16255 2 14307036 to 14307039 3 + TSS region transcription start site region 16255
Tssr16256 2 14310899 to 14310905 6 + TSS region transcription start site region 16256
Tssr16257 2 14314280 to 14314300 20 + TSS region transcription start site region 16257
Tssr16258 2 14314428 to 14314449 21 + TSS region transcription start site region 16258
Tssr16259 2 14315348 to 14315361 13 + TSS region transcription start site region 16259
Tssr16260 2 14316180 to 14316193 13 + TSS region transcription start site region 16260
Tssr16261 2 14331063 to 14331081 18 + TSS region transcription start site region 16261
Tssr16262 2 14331109 to 14331131 22 + TSS region transcription start site region 16262
Tssr16263 2 14331135 to 14331196 61 + TSS region transcription start site region 16263
Tssr16264 2 14331371 to 14331382 11 + TSS region transcription start site region 16264
Tssr16265 2 14331429 to 14331451 22 + TSS region transcription start site region 16265
Tssr16266 2 14331456 to 14331480 24 + TSS region transcription start site region 16266
Tssr16267 2 14331496 to 14331518 22 + TSS region transcription start site region 16267
Tssr16268 2 14341887 to 14341894 7 + TSS region transcription start site region 16268
Gm37697 2 14345677 to 14347520 1843 + unclassified gene predicted gene, 37697
Slc39a12 2 14388316 to 14494977 106661 + protein coding gene solute carrier family 39 (zinc transporter), member 12
Tssr16269 2 14388390 to 14388420 30 + TSS region transcription start site region 16269
Tssr16270 2 14388434 to 14388451 17 + TSS region transcription start site region 16270
D2Ucl2 2 14428328 to 14428816 488 DNA segment DNA segment, Chr 2, University College London 2
C030041M11Rik 2 14483089 to 14483820 731 unclassified gene RIKEN cDNA C030041M11 gene
Tssr408 2 14512591 to 14512594 3 + TSS region transcription start site region 408
Gm13266 2 14512591 to 14542811 30220 + lncRNA gene predicted gene 13266
D2Mit317 2 14598379 to 14598623 244 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 317
Gm32741 2 14598741 to 14603664 4923 - lncRNA gene predicted gene, 32741
Cpgi11219 2 14603764 to 14605175 1411 CpG island CpG island 11219
Tssr16271 2 14603826 to 14603859 33 + TSS region transcription start site region 16271
Gm10849 2 14603990 to 14604611 621 - pseudogene predicted gene 10849
Cacnb2 2 14604053 to 14988811 384758 + protein coding gene calcium channel, voltage-dependent, beta 2 subunit
Tssr16272 2 14604200 to 14604203 3 + TSS region transcription start site region 16272
Tssr16273 2 14604212 to 14604241 29 + TSS region transcription start site region 16273
Tssr16274 2 14604252 to 14604271 19 + TSS region transcription start site region 16274
Gm38105 2 14611217 to 14613837 2620 + unclassified gene predicted gene, 38105
Gm13268 2 14626889 to 14627321 432 - pseudogene predicted gene 13268
Gm13312 2 14672255 to 14672972 717 + pseudogene predicted gene 13312
2900092N22Rik 2 14673404 to 14674812 1408 + unclassified gene RIKEN cDNA 2900092N22 gene
Gm13314 2 14691394 to 14691728 334 - pseudogene predicted gene 13314
Gm13311 2 14692871 to 14693249 378 - pseudogene predicted gene 13311
2900072G11Rik 2 14703152 to 14704716 1564 unclassified gene RIKEN cDNA 2900072G11 gene
Gm10848 2 14706834 to 14739722 32888 - antisense lncRNA gene predicted gene 10848
Gm37006 2 14707665 to 14710338 2673 + unclassified gene predicted gene, 37006
Gm13315 2 14721134 to 14722124 990 + pseudogene predicted gene 13315
Gm38273 2 14735546 to 14737927 2381 - unclassified gene predicted gene, 38273
Tssr16275 2 14739219 to 14739242 23 + TSS region transcription start site region 16275
Tssr16276 2 14739250 to 14739290 40 + TSS region transcription start site region 16276
Cpgi11220 2 14739552 to 14739843 291 CpG island CpG island 11220
Tssr22733 2 14739928 to 14739956 28 - TSS region transcription start site region 22733
Gm13269 2 14740372 to 14767024 26652 - antisense lncRNA gene predicted gene 13269
D2Mit360 2 14762038 to 14762124 86 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 360
Tssr16277 2 14763112 to 14763142 30 + TSS region transcription start site region 16277
Tssr16278 2 14763146 to 14763158 12 + TSS region transcription start site region 16278
Tssr16279 2 14763249 to 14763259 10 + TSS region transcription start site region 16279
Tssr16280 2 14763445 to 14763457 12 + TSS region transcription start site region 16280