Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13658952-14098958

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St8sia6 2 13651021 to 13794064 143043 - protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Gm37126 2 13672516 to 13674434 1918 + antisense lncRNA gene predicted gene, 37126
Cpgi11216 2 13792760 to 13794163 1403 CpG island CpG island 11216
Tssr22720 2 13793031 to 13793036 5 - TSS region transcription start site region 22720
Tssr22721 2 13793728 to 13793753 25 - TSS region transcription start site region 22721
Tssr22722 2 13793793 to 13793806 13 - TSS region transcription start site region 22722
Tssr22723 2 13793817 to 13793879 62 - TSS region transcription start site region 22723
Tssr22724 2 13793911 to 13793920 9 - TSS region transcription start site region 22724
Tssr22725 2 13794013 to 13794025 12 - TSS region transcription start site region 22725
Tssr22726 2 13794032 to 13794041 9 - TSS region transcription start site region 22726
Tssr16222 2 13878952 to 13878958 6 + TSS region transcription start site region 16222
D930036K23Rik 2 14016086 to 14020049 3963 - unclassified gene RIKEN cDNA D930036K23 gene
5730447C08Rik 2 14020977 to 14021395 418 unclassified gene RIKEN cDNA 5730447C08 gene
D2Bwg0405e 2 14023789 to 14023952 163 DNA segment DNA segment, Chr 2, Brigham & Women's Genetics 0405 expressed
Hacd1 2 14026829 to 14056035 29206 - protein coding gene 3-hydroxyacyl-CoA dehydratase 1
Gm37894 2 14037825 to 14040423 2598 - unclassified gene predicted gene, 37894
Cpgi11217 2 14054913 to 14056485 1572 CpG island CpG island 11217
Tssr22727 2 14055890 to 14055917 27 - TSS region transcription start site region 22727
Tssr22728 2 14055929 to 14055956 27 - TSS region transcription start site region 22728
Tssr22729 2 14055963 to 14056022 59 - TSS region transcription start site region 22729
Tssr22730 2 14056029 to 14056044 15 - TSS region transcription start site region 22730
Tssr22731 2 14059899 to 14059915 16 - TSS region transcription start site region 22731
Stamos 2 14070333 to 14073934 3601 - lncRNA gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand
Cpgi11218 2 14073507 to 14074701 1194 CpG island CpG island 11218
Tssr16223 2 14073607 to 14073625 18 + TSS region transcription start site region 16223
Tssr16224 2 14073629 to 14073672 43 + TSS region transcription start site region 16224
Stam 2 14073654 to 14148338 74684 + protein coding gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Tssr22732 2 14073851 to 14073867 16 - TSS region transcription start site region 22732
Tssr16225 2 14074091 to 14074146 55 + TSS region transcription start site region 16225
Tssr16226 2 14074147 to 14074191 44 + TSS region transcription start site region 16226
Tssr16227 2 14074218 to 14074235 17 + TSS region transcription start site region 16227