Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:136511398-137051420

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32746 2 136508158 to 136512187 4029 - lncRNA gene predicted gene, 32746
Tssr26520 2 136512015 to 136512062 47 - TSS region transcription start site region 26520
Cpgi12325 2 136532036 to 136532433 397 CpG island CpG island 12325
Tssr20402 2 136532180 to 136532215 35 + TSS region transcription start site region 20402
Tssr20403 2 136532243 to 136532259 16 + TSS region transcription start site region 20403
Tssr20404 2 136532266 to 136532287 21 + TSS region transcription start site region 20404
Ankef1 2 136532321 to 136555854 23533 + protein coding gene ankyrin repeat and EF-hand domain containing 1
Gm32659 2 136533833 to 136714163 180330 - lncRNA gene predicted gene, 32659
Cpgi12326 2 136549764 to 136550049 285 CpG island CpG island 12326
Tssr669 2 136552912 to 136552920 8 + TSS region transcription start site region 669
Cpgi12327 2 136678590 to 136679118 528 CpG island CpG island 12327
Gm36967 2 136679961 to 136680226 265 + unclassified gene predicted gene, 36967
Cpgi12328 2 136712002 to 136712385 383 CpG island CpG island 12328
Tssr20405 2 136713295 to 136713313 18 + TSS region transcription start site region 20405
Tssr20406 2 136713444 to 136713492 48 + TSS region transcription start site region 20406
Snap25 2 136713453 to 136782428 68975 + protein coding gene synaptosomal-associated protein 25
Tssr20407 2 136713507 to 136713528 21 + TSS region transcription start site region 20407
Tssr20408 2 136713540 to 136713556 16 + TSS region transcription start site region 20408
Cpgi12329 2 136714075 to 136714433 358 CpG island CpG island 12329
Tssr20409 2 136723774 to 136723778 4 + TSS region transcription start site region 20409
Gm14053 2 136744146 to 136744615 469 - pseudogene predicted gene 14053
Tssr20410 2 136756071 to 136756142 71 + TSS region transcription start site region 20410
Tssr20411 2 136758304 to 136758330 26 + TSS region transcription start site region 20411
Tssr20412 2 136764036 to 136764055 19 + TSS region transcription start site region 20412
Tssr20413 2 136765389 to 136765402 13 + TSS region transcription start site region 20413
Tssr20414 2 136770127 to 136770142 15 + TSS region transcription start site region 20414
Tssr20415 2 136770146 to 136770152 6 + TSS region transcription start site region 20415
Tssr20416 2 136772979 to 136772982 3 + TSS region transcription start site region 20416
Tssr20417 2 136773924 to 136773961 37 + TSS region transcription start site region 20417
Tssr20418 2 136773973 to 136773999 26 + TSS region transcription start site region 20418
Tssr20419 2 136777330 to 136777341 11 + TSS region transcription start site region 20419
Tssr20420 2 136777377 to 136777448 71 + TSS region transcription start site region 20420
Tssr20421 2 136781071 to 136781081 10 + TSS region transcription start site region 20421
Tssr20422 2 136781127 to 136781164 37 + TSS region transcription start site region 20422
Tssr20423 2 136781172 to 136781224 52 + TSS region transcription start site region 20423
Tssr26521 2 136781228 to 136781274 46 - TSS region transcription start site region 26521
Tssr20424 2 136781286 to 136781293 7 + TSS region transcription start site region 20424
Tssr20425 2 136781361 to 136781370 9 + TSS region transcription start site region 20425
Tssr20426 2 136781398 to 136781420 22 + TSS region transcription start site region 20426
Tssr20427 2 136781457 to 136781472 15 + TSS region transcription start site region 20427
Tssr20428 2 136781589 to 136781607 18 + TSS region transcription start site region 20428
Tssr20429 2 136781761 to 136781770 9 + TSS region transcription start site region 20429
Tssr20430 2 136781822 to 136781827 5 + TSS region transcription start site region 20430
Tssr20431 2 136781837 to 136781842 5 + TSS region transcription start site region 20431
Tssr20432 2 136781881 to 136781888 7 + TSS region transcription start site region 20432
Tssr20433 2 136781935 to 136781942 7 + TSS region transcription start site region 20433
Gm39943 2 136793417 to 136805072 11655 - lncRNA gene predicted gene, 39943
Gm46767 2 136805208 to 136828496 23288 - lncRNA gene predicted gene, 46767
Tssr20434 2 136809344 to 136809350 6 + TSS region transcription start site region 20434
Mkks 2 136873780 to 136891389 17609 - protein coding gene McKusick-Kaufman syndrome
Cpgi12330 2 136890863 to 136891685 822 CpG island CpG island 12330
Tssr26522 2 136891115 to 136891122 7 - TSS region transcription start site region 26522
Tssr26523 2 136891131 to 136891186 55 - TSS region transcription start site region 26523
Slx4ip 2 136891218 to 137071950 180732 + protein coding gene SLX4 interacting protein
Tssr26524 2 136891363 to 136891413 50 - TSS region transcription start site region 26524
Tssr20435 2 136891563 to 136891599 36 + TSS region transcription start site region 20435
Tssr20436 2 136891601 to 136891615 14 + TSS region transcription start site region 20436
Cpgi12331 2 136892026 to 136892438 412 CpG island CpG island 12331
Tssr20437 2 136892208 to 136892241 33 + TSS region transcription start site region 20437
Tssr20438 2 136892249 to 136892272 23 + TSS region transcription start site region 20438
Tssr20439 2 136892280 to 136892294 14 + TSS region transcription start site region 20439
Tssr20440 2 136910151 to 136910171 20 + TSS region transcription start site region 20440
Tssr20441 2 136910177 to 136910188 11 + TSS region transcription start site region 20441
Tssr20442 2 136910625 to 136910638 13 + TSS region transcription start site region 20442
Tssr20443 2 136911009 to 136911029 20 + TSS region transcription start site region 20443
Tssr20444 2 136911231 to 136911243 12 + TSS region transcription start site region 20444
Tssr20445 2 136911392 to 136911403 11 + TSS region transcription start site region 20445
Tssr20446 2 136915361 to 136915381 20 + TSS region transcription start site region 20446
Tssr20447 2 136922291 to 136922298 7 + TSS region transcription start site region 20447
Tssr20448 2 136935027 to 136935030 3 + TSS region transcription start site region 20448
Tssr20449 2 136944043 to 136944047 4 + TSS region transcription start site region 20449
Gm38479 2 136944077 to 136947476 3399 + lncRNA gene predicted gene, 38479
D2Dcr81 2 136961903 to 136962017 114 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 81
Vclq1 2 137000000 to 62000000 -75000000 QTL curvilinear velocity QTL 1
Tssr20450 2 137028101 to 137028112 11 + TSS region transcription start site region 20450