Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:136111951-136891959

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pak7 2 136081104 to 136387967 306863 - protein coding gene p21 (RAC1) activated kinase 7
2900018K06Rik 2 136120254 to 136120720 466 unclassified gene RIKEN cDNA 2900018K06 gene
Gm14218 2 136137006 to 136140161 3155 + antisense lncRNA gene predicted gene 14218
Gm39942 2 136179602 to 136183686 4084 + lncRNA gene predicted gene, 39942
D2Mit136 2 136353842 to 136353991 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 136
Cpgi12324 2 136387214 to 136387779 565 CpG island CpG island 12324
Tssr26515 2 136387691 to 136387698 7 - TSS region transcription start site region 26515
Tssr26516 2 136387740 to 136387798 58 - TSS region transcription start site region 26516
Tssr26517 2 136387804 to 136387820 16 - TSS region transcription start site region 26517
Tssr26518 2 136387929 to 136387985 56 - TSS region transcription start site region 26518
Tssr26519 2 136387994 to 136388005 11 - TSS region transcription start site region 26519
Gm14056 2 136399062 to 136399703 641 + pseudogene predicted gene 14056
Gm14054 2 136402719 to 136403422 703 - pseudogene predicted gene 14054
Gm32546 2 136445260 to 136486403 41143 - lncRNA gene predicted gene, 32546
Tssr20395 2 136501904 to 136501917 13 + TSS region transcription start site region 20395
Tssr20396 2 136501951 to 136501959 8 + TSS region transcription start site region 20396
Tssr20397 2 136501966 to 136501977 11 + TSS region transcription start site region 20397
Tssr20398 2 136501978 to 136501997 19 + TSS region transcription start site region 20398
Tssr668 2 136502036 to 136502039 3 + TSS region transcription start site region 668
Tssr20399 2 136502046 to 136502047 1 + TSS region transcription start site region 20399
Tssr20400 2 136502050 to 136502061 11 + TSS region transcription start site region 20400
Tssr20401 2 136502243 to 136502260 17 + TSS region transcription start site region 20401
Gm32746 2 136508158 to 136512187 4029 - lncRNA gene predicted gene, 32746
Tssr26520 2 136512015 to 136512062 47 - TSS region transcription start site region 26520
Cpgi12325 2 136532036 to 136532433 397 CpG island CpG island 12325
Tssr20402 2 136532180 to 136532215 35 + TSS region transcription start site region 20402
Tssr20403 2 136532243 to 136532259 16 + TSS region transcription start site region 20403
Tssr20404 2 136532266 to 136532287 21 + TSS region transcription start site region 20404
Ankef1 2 136532321 to 136555854 23533 + protein coding gene ankyrin repeat and EF-hand domain containing 1
Gm32659 2 136533833 to 136714163 180330 - lncRNA gene predicted gene, 32659
Cpgi12326 2 136549764 to 136550049 285 CpG island CpG island 12326
Tssr669 2 136552912 to 136552920 8 + TSS region transcription start site region 669
Cpgi12327 2 136678590 to 136679118 528 CpG island CpG island 12327
Gm36967 2 136679961 to 136680226 265 + unclassified gene predicted gene, 36967
Cpgi12328 2 136712002 to 136712385 383 CpG island CpG island 12328
Tssr20405 2 136713295 to 136713313 18 + TSS region transcription start site region 20405
Tssr20406 2 136713444 to 136713492 48 + TSS region transcription start site region 20406
Snap25 2 136713453 to 136782428 68975 + protein coding gene synaptosomal-associated protein 25
Tssr20407 2 136713507 to 136713528 21 + TSS region transcription start site region 20407
Tssr20408 2 136713540 to 136713556 16 + TSS region transcription start site region 20408
Cpgi12329 2 136714075 to 136714433 358 CpG island CpG island 12329
Tssr20409 2 136723774 to 136723778 4 + TSS region transcription start site region 20409
Gm14053 2 136744146 to 136744615 469 - pseudogene predicted gene 14053
Tssr20410 2 136756071 to 136756142 71 + TSS region transcription start site region 20410
Tssr20411 2 136758304 to 136758330 26 + TSS region transcription start site region 20411
Tssr20412 2 136764036 to 136764055 19 + TSS region transcription start site region 20412
Tssr20413 2 136765389 to 136765402 13 + TSS region transcription start site region 20413
Tssr20414 2 136770127 to 136770142 15 + TSS region transcription start site region 20414
Tssr20415 2 136770146 to 136770152 6 + TSS region transcription start site region 20415
Tssr20416 2 136772979 to 136772982 3 + TSS region transcription start site region 20416
Tssr20417 2 136773924 to 136773961 37 + TSS region transcription start site region 20417
Tssr20418 2 136773973 to 136773999 26 + TSS region transcription start site region 20418
Tssr20419 2 136777330 to 136777341 11 + TSS region transcription start site region 20419
Tssr20420 2 136777377 to 136777448 71 + TSS region transcription start site region 20420
Tssr20421 2 136781071 to 136781081 10 + TSS region transcription start site region 20421
Tssr20422 2 136781127 to 136781164 37 + TSS region transcription start site region 20422
Tssr20423 2 136781172 to 136781224 52 + TSS region transcription start site region 20423
Tssr26521 2 136781228 to 136781274 46 - TSS region transcription start site region 26521
Tssr20424 2 136781286 to 136781293 7 + TSS region transcription start site region 20424
Tssr20425 2 136781361 to 136781370 9 + TSS region transcription start site region 20425
Tssr20426 2 136781398 to 136781420 22 + TSS region transcription start site region 20426
Tssr20427 2 136781457 to 136781472 15 + TSS region transcription start site region 20427
Tssr20428 2 136781589 to 136781607 18 + TSS region transcription start site region 20428
Tssr20429 2 136781761 to 136781770 9 + TSS region transcription start site region 20429
Tssr20430 2 136781822 to 136781827 5 + TSS region transcription start site region 20430
Tssr20431 2 136781837 to 136781842 5 + TSS region transcription start site region 20431
Tssr20432 2 136781881 to 136781888 7 + TSS region transcription start site region 20432
Tssr20433 2 136781935 to 136781942 7 + TSS region transcription start site region 20433
Gm39943 2 136793417 to 136805072 11655 - lncRNA gene predicted gene, 39943
Gm46767 2 136805208 to 136828496 23288 - lncRNA gene predicted gene, 46767
Tssr20434 2 136809344 to 136809350 6 + TSS region transcription start site region 20434
Mkks 2 136873780 to 136891389 17609 - protein coding gene McKusick-Kaufman syndrome
Cpgi12330 2 136890863 to 136891685 822 CpG island CpG island 12330
Tssr26522 2 136891115 to 136891122 7 - TSS region transcription start site region 26522
Tssr26523 2 136891131 to 136891186 55 - TSS region transcription start site region 26523
Slx4ip 2 136891218 to 137071950 180732 + protein coding gene SLX4 interacting protein
Tssr26524 2 136891363 to 136891413 50 - TSS region transcription start site region 26524
Tssr20435 2 136891563 to 136891599 36 + TSS region transcription start site region 20435
Tssr20436 2 136891601 to 136891615 14 + TSS region transcription start site region 20436