Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13578817-14008879

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vim 2 13574311 to 13582826 8515 + protein coding gene vimentin
Tssr16202 2 13578837 to 13578850 13 + TSS region transcription start site region 16202
Tssr16203 2 13578914 to 13578925 11 + TSS region transcription start site region 16203
Tssr16204 2 13579029 to 13579053 24 + TSS region transcription start site region 16204
Tssr16205 2 13579147 to 13579160 13 + TSS region transcription start site region 16205
Tssr16206 2 13579411 to 13579514 103 + TSS region transcription start site region 16206
Tssr16207 2 13579566 to 13579579 13 + TSS region transcription start site region 16207
Tssr16208 2 13580010 to 13580029 19 + TSS region transcription start site region 16208
Tssr16209 2 13580030 to 13580095 65 + TSS region transcription start site region 16209
Tssr22715 2 13580076 to 13580103 27 - TSS region transcription start site region 22715
Tssr16210 2 13580103 to 13580115 12 + TSS region transcription start site region 16210
Tssr16211 2 13580121 to 13580156 35 + TSS region transcription start site region 16211
Tssr16212 2 13580175 to 13580196 21 + TSS region transcription start site region 16212
Tssr22716 2 13580213 to 13580233 20 - TSS region transcription start site region 22716
Tssr16213 2 13580630 to 13580656 26 + TSS region transcription start site region 16213
Tssr16214 2 13580679 to 13580689 10 + TSS region transcription start site region 16214
Tssr16215 2 13580708 to 13580748 40 + TSS region transcription start site region 16215
Tssr16216 2 13581599 to 13581630 31 + TSS region transcription start site region 16216
Tssr16217 2 13581637 to 13581648 11 + TSS region transcription start site region 16217
Tssr22717 2 13581640 to 13581699 59 - TSS region transcription start site region 22717
Tssr16218 2 13582462 to 13582542 80 + TSS region transcription start site region 16218
Tssr22718 2 13582546 to 13582570 24 - TSS region transcription start site region 22718
Tssr16219 2 13582610 to 13582626 16 + TSS region transcription start site region 16219
Tssr16220 2 13582629 to 13582678 49 + TSS region transcription start site region 16220
Tssr22719 2 13582632 to 13582686 54 - TSS region transcription start site region 22719
Tssr16221 2 13582770 to 13582790 20 + TSS region transcription start site region 16221
St8sia6 2 13651021 to 13794064 143043 - protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Gm37126 2 13672516 to 13674434 1918 + antisense lncRNA gene predicted gene, 37126
Cpgi11216 2 13792760 to 13794163 1403 CpG island CpG island 11216
Tssr22720 2 13793031 to 13793036 5 - TSS region transcription start site region 22720
Tssr22721 2 13793728 to 13793753 25 - TSS region transcription start site region 22721
Tssr22722 2 13793793 to 13793806 13 - TSS region transcription start site region 22722
Tssr22723 2 13793817 to 13793879 62 - TSS region transcription start site region 22723
Tssr22724 2 13793911 to 13793920 9 - TSS region transcription start site region 22724
Tssr22725 2 13794013 to 13794025 12 - TSS region transcription start site region 22725
Tssr22726 2 13794032 to 13794041 9 - TSS region transcription start site region 22726
Tssr16222 2 13878952 to 13878958 6 + TSS region transcription start site region 16222