Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:135274540-136044591

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbvq1 2 126200000 to 135600000 9400000 QTL trabecular bone volume QTL 1
Plcb1 2 134786164 to 135475258 689094 + protein coding gene phospholipase C, beta 1
D2Mit208 2 135280668 to 135280855 187 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 208
D2Dcr80 2 135280685 to 135280788 103 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 80
Tssr665 2 135309184 to 135309187 3 + TSS region transcription start site region 665
Tssr20364 2 135312392 to 135312394 2 + TSS region transcription start site region 20364
Tssr20365 2 135336375 to 135336379 4 + TSS region transcription start site region 20365
Tssr20366 2 135364771 to 135364784 13 + TSS region transcription start site region 20366
D2Mit400 2 135413882 to 135413981 99 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 400
Tssr20367 2 135473793 to 135473802 9 + TSS region transcription start site region 20367
Gm31993 2 135541387 to 135550209 8822 + lncRNA gene predicted gene, 31993
9630028H03Rik 2 135580530 to 135583220 2690 - antisense lncRNA gene RIKEN cDNA 9630028H03 gene
Tssr26514 2 135583289 to 135583314 25 - TSS region transcription start site region 26514
Rvfs1 2 135590624 to 173607823 38017199 QTL Rift Valley fever susceptibility 1
D2Mit306 2 135590624 to 135590730 106 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 306
Tssr20368 2 135646517 to 135646529 12 + TSS region transcription start site region 20368
Platr3 2 135648907 to 135652063 3156 + lincRNA gene pluripotency associated transcript 3
Cpgi12321 2 135658505 to 135660122 1617 CpG island CpG island 12321
Plcb4 2 135659011 to 136014593 355582 + protein coding gene phospholipase C, beta 4
Tssr20369 2 135659159 to 135659174 15 + TSS region transcription start site region 20369
Tssr20370 2 135659293 to 135659357 64 + TSS region transcription start site region 20370
Tssr20371 2 135659540 to 135659591 51 + TSS region transcription start site region 20371
Tssr20372 2 135659593 to 135659604 11 + TSS region transcription start site region 20372
Tssr20373 2 135659625 to 135659650 25 + TSS region transcription start site region 20373
Tssr20374 2 135659685 to 135659713 28 + TSS region transcription start site region 20374
Gm14209 2 135669453 to 135670425 972 + sense intronic lncRNA gene predicted gene 14209
Tssr20375 2 135674247 to 135674275 28 + TSS region transcription start site region 20375
Gm14211 2 135686174 to 135693154 6980 - lincRNA gene predicted gene 14211
Tssr20376 2 135764880 to 135764908 28 + TSS region transcription start site region 20376
Tssr20377 2 135764910 to 135764935 25 + TSS region transcription start site region 20377
Tssr20378 2 135764958 to 135764973 15 + TSS region transcription start site region 20378
Gm14210 2 135811945 to 135812927 982 - lincRNA gene predicted gene 14210
Tssr20379 2 135929503 to 135929512 9 + TSS region transcription start site region 20379
Tssr20380 2 135987604 to 135987606 2 + TSS region transcription start site region 20380
Tssr20381 2 136007342 to 136007356 14 + TSS region transcription start site region 20381
Tssr666 2 136012008 to 136012014 6 + TSS region transcription start site region 666
Gm26227 2 136026151 to 136026251 100 - snRNA gene predicted gene, 26227