Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13514651-13574673

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trdmt1 2 13509014 to 13544668 35654 - protein coding gene tRNA aspartic acid methyltransferase 1
Cpgi11214 2 13544420 to 13544795 375 CpG island CpG island 11214
Tssr22709 2 13544651 to 13544673 22 - TSS region transcription start site region 22709
Gm9875 2 13558323 to 13571736 13413 + lncRNA gene predicted gene 9875
Tssr22710 2 13558505 to 13558512 7 - TSS region transcription start site region 22710
D2Mit149.1 2 13571471 to 13571680 209 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149.1
D2Mit149 2 13571654 to 13571852 198 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149
Tssr22711 2 13572015 to 13572019 4 - TSS region transcription start site region 22711
Tssr22712 2 13573557 to 13573565 8 - TSS region transcription start site region 22712
Tssr16187 2 13573680 to 13573710 30 + TSS region transcription start site region 16187
Cpgi11215 2 13573898 to 13575329 1431 CpG island CpG island 11215
Tssr16188 2 13574006 to 13574028 22 + TSS region transcription start site region 16188
Tssr16189 2 13574032 to 13574075 43 + TSS region transcription start site region 16189
Tssr16190 2 13574094 to 13574114 20 + TSS region transcription start site region 16190
Tssr16191 2 13574299 to 13574318 19 + TSS region transcription start site region 16191
Vim 2 13574311 to 13582826 8515 + protein coding gene vimentin
Tssr22713 2 13574552 to 13574569 17 - TSS region transcription start site region 22713