Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:13269752-13579763

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rsu1 2 13076967 to 13271416 194449 - protein coding gene Ras suppressor protein 1
Cpgi11213 2 13271170 to 13271843 673 CpG island CpG island 11213
Tssr22690 2 13271268 to 13271348 80 - TSS region transcription start site region 22690
Tssr22691 2 13271419 to 13271437 18 - TSS region transcription start site region 22691
Tssr22692 2 13271438 to 13271446 8 - TSS region transcription start site region 22692
Gm13270 2 13271540 to 13310119 38579 + lncRNA gene predicted gene 13270
Tssr16184 2 13271579 to 13271630 51 + TSS region transcription start site region 16184
Cubn 2 13276338 to 13491813 215475 - protein coding gene cubilin (intrinsic factor-cobalamin receptor)
Tssr22693 2 13283265 to 13283273 8 - TSS region transcription start site region 22693
Tssr22694 2 13410800 to 13410805 5 - TSS region transcription start site region 22694
Tssr16185 2 13411015 to 13411019 4 + TSS region transcription start site region 16185
Tssr22695 2 13413584 to 13413597 13 - TSS region transcription start site region 22695
Tssr22696 2 13424752 to 13424763 11 - TSS region transcription start site region 22696
Tssr22697 2 13424768 to 13424785 17 - TSS region transcription start site region 22697
Tssr16186 2 13481070 to 13481101 31 + TSS region transcription start site region 16186
Tssr22698 2 13491847 to 13491890 43 - TSS region transcription start site region 22698
Tssr22699 2 13491891 to 13491896 5 - TSS region transcription start site region 22699
Tssr22700 2 13491900 to 13491940 40 - TSS region transcription start site region 22700
Tssr22701 2 13491953 to 13491958 5 - TSS region transcription start site region 22701
Tssr22702 2 13491960 to 13491974 14 - TSS region transcription start site region 22702
Tssr22703 2 13491977 to 13492025 48 - TSS region transcription start site region 22703
Tssr22704 2 13492034 to 13492046 12 - TSS region transcription start site region 22704
Tssr22705 2 13493651 to 13493657 6 - TSS region transcription start site region 22705
Tssr22706 2 13493660 to 13493670 10 - TSS region transcription start site region 22706
Tssr22707 2 13493674 to 13493690 16 - TSS region transcription start site region 22707
Tssr22708 2 13493695 to 13493705 10 - TSS region transcription start site region 22708
Trdmt1 2 13509014 to 13544668 35654 - protein coding gene tRNA aspartic acid methyltransferase 1
Cpgi11214 2 13544420 to 13544795 375 CpG island CpG island 11214
Tssr22709 2 13544651 to 13544673 22 - TSS region transcription start site region 22709
Gm9875 2 13558323 to 13571736 13413 + lncRNA gene predicted gene 9875
Tssr22710 2 13558505 to 13558512 7 - TSS region transcription start site region 22710
D2Mit149.1 2 13571471 to 13571680 209 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149.1
D2Mit149 2 13571654 to 13571852 198 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 149
Tssr22711 2 13572015 to 13572019 4 - TSS region transcription start site region 22711
Tssr22712 2 13573557 to 13573565 8 - TSS region transcription start site region 22712
Tssr16187 2 13573680 to 13573710 30 + TSS region transcription start site region 16187
Cpgi11215 2 13573898 to 13575329 1431 CpG island CpG island 11215
Tssr16188 2 13574006 to 13574028 22 + TSS region transcription start site region 16188
Tssr16189 2 13574032 to 13574075 43 + TSS region transcription start site region 16189
Tssr16190 2 13574094 to 13574114 20 + TSS region transcription start site region 16190
Tssr16191 2 13574299 to 13574318 19 + TSS region transcription start site region 16191
Vim 2 13574311 to 13582826 8515 + protein coding gene vimentin
Tssr22713 2 13574552 to 13574569 17 - TSS region transcription start site region 22713
Tssr22714 2 13574966 to 13575029 63 - TSS region transcription start site region 22714
Tssr16192 2 13575164 to 13575177 13 + TSS region transcription start site region 16192
Tssr16193 2 13575351 to 13575360 9 + TSS region transcription start site region 16193
Tssr16194 2 13575517 to 13575528 11 + TSS region transcription start site region 16194
Tssr16195 2 13575533 to 13575557 24 + TSS region transcription start site region 16195
Tssr16196 2 13575563 to 13575580 17 + TSS region transcription start site region 16196
Tssr16197 2 13578403 to 13578464 61 + TSS region transcription start site region 16197
Tssr16198 2 13578626 to 13578671 45 + TSS region transcription start site region 16198
Tssr16199 2 13578723 to 13578734 11 + TSS region transcription start site region 16199
Tssr16200 2 13578746 to 13578758 12 + TSS region transcription start site region 16200
Tssr16201 2 13578765 to 13578778 13 + TSS region transcription start site region 16201
Tssr16202 2 13578837 to 13578850 13 + TSS region transcription start site region 16202
Tssr16203 2 13578914 to 13578925 11 + TSS region transcription start site region 16203
Tssr16204 2 13579029 to 13579053 24 + TSS region transcription start site region 16204
Tssr16205 2 13579147 to 13579160 13 + TSS region transcription start site region 16205
Tssr16206 2 13579411 to 13579514 103 + TSS region transcription start site region 16206
Tssr16207 2 13579566 to 13579579 13 + TSS region transcription start site region 16207