Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:132252489-132772509

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcna 2 132249286 to 132253180 3894 - protein coding gene proliferating cell nuclear antigen
Cpgi12302 2 132252505 to 132253560 1055 CpG island CpG island 12302
Tssr20299 2 132252785 to 132252819 34 + TSS region transcription start site region 20299
Tssr26467 2 132253077 to 132253103 26 - TSS region transcription start site region 26467
Tssr26468 2 132253174 to 132253217 43 - TSS region transcription start site region 26468
Tssr26469 2 132253227 to 132253236 9 - TSS region transcription start site region 26469
AV099323 2 132253246 to 132260927 7681 + antisense lncRNA gene expressed sequence AV099323
Tssr20300 2 132253349 to 132253388 39 + TSS region transcription start site region 20300
Tssr20301 2 132253391 to 132253435 44 + TSS region transcription start site region 20301
Cpgi12303 2 132262797 to 132263959 1162 CpG island CpG island 12303
Tssr20302 2 132263136 to 132263268 132 + TSS region transcription start site region 20302
Cds2 2 132263148 to 132312050 48902 + protein coding gene CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
Tssr20303 2 132263273 to 132263318 45 + TSS region transcription start site region 20303
Tssr20304 2 132263322 to 132263334 12 + TSS region transcription start site region 20304
Tssr20305 2 132263436 to 132263445 9 + TSS region transcription start site region 20305
Gm46766 2 132263504 to 132267647 4143 + lncRNA gene predicted gene, 46766
Cpgi12304 2 132264100 to 132264332 232 CpG island CpG island 12304
Tssr26470 2 132264213 to 132264224 11 - TSS region transcription start site region 26470
Tssr20306 2 132281154 to 132281197 43 + TSS region transcription start site region 20306
Tssr20307 2 132289398 to 132289410 12 + TSS region transcription start site region 20307
Prokr2 2 132369705 to 132385501 15796 - protein coding gene prokineticin receptor 2
Ltpr2f 2 132370937 to 132371074 137 QTL Leishmania tropica response 2f
Ltpr2g 2 132370937 to 132371074 137 QTL Leishmania tropica response 2g
D2Mit257 2 132370937 to 132371074 137 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 257
D2Dcr75 2 132370945 to 132371047 102 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 75
Cpgi12305 2 132373455 to 132374011 556 CpG island CpG island 12305
Cpgi12306 2 132384617 to 132385488 871 CpG island CpG island 12306
Tssr26471 2 132385392 to 132385434 42 - TSS region transcription start site region 26471
Tssr26472 2 132385435 to 132385448 13 - TSS region transcription start site region 26472
4921508D12Rik 2 132424741 to 132452499 27758 + lincRNA gene RIKEN cDNA 4921508D12 gene
Tssr26473 2 132455292 to 132455302 10 - TSS region transcription start site region 26473
Gm14095 2 132482516 to 132486590 4074 - lincRNA gene predicted gene 14095
1700058J15Rik 2 132489671 to 132490622 951 unclassified gene RIKEN cDNA 1700058J15 gene
Tssr20308 2 132490697 to 132490707 10 + TSS region transcription start site region 20308
Tssr20309 2 132490711 to 132490736 25 + TSS region transcription start site region 20309
1700026D11Rik 2 132490728 to 132524057 33329 + antisense lncRNA gene RIKEN cDNA 1700026D11 gene
Tssr26474 2 132512489 to 132512509 20 - TSS region transcription start site region 26474
Tssr26475 2 132513902 to 132513919 17 - TSS region transcription start site region 26475
Gpcpd1 2 132529082 to 132578258 49176 - protein coding gene glycerophosphocholine phosphodiesterase 1
E030016H06Rik 2 132559005 to 132561681 2676 unclassified gene RIKEN cDNA E030016H06 gene
Tssr26476 2 132574143 to 132574147 4 - TSS region transcription start site region 26476
Tssr20310 2 132576054 to 132576069 15 + TSS region transcription start site region 20310
Cpgi12307 2 132577460 to 132578526 1066 CpG island CpG island 12307
Tssr20311 2 132578022 to 132578034 12 + TSS region transcription start site region 20311
Tssr26477 2 132578128 to 132578153 25 - TSS region transcription start site region 26477
Tssr26478 2 132578155 to 132578222 67 - TSS region transcription start site region 26478
Tssr26479 2 132578244 to 132578255 11 - TSS region transcription start site region 26479
Tssr20312 2 132597448 to 132597461 13 + TSS region transcription start site region 20312
AU019990 2 132598196 to 132653067 54871 + lincRNA gene expressed sequence AU019990
Tssr20313 2 132599442 to 132599462 20 + TSS region transcription start site region 20313
Tssr663 2 132599504 to 132599525 21 + TSS region transcription start site region 663
Tssr26480 2 132601168 to 132601171 3 - TSS region transcription start site region 26480
Rpl23a-ps4 2 132662242 to 132662696 454 + pseudogene ribosomal protein L23A, pseudogene 4
Tssr26481 2 132670386 to 132670395 9 - TSS region transcription start site region 26481
Gm14099 2 132673376 to 132673979 603 - pseudogene predicted gene 14099
Gm14098 2 132678712 to 132679236 524 + pseudogene predicted gene 14098
Shld1 2 132686931 to 132751055 64124 + protein coding gene shieldin complex subunit 1
Tssr20314 2 132686944 to 132686982 38 + TSS region transcription start site region 20314
Cpgi12308 2 132686971 to 132687149 178 CpG island CpG island 12308
Tssr20315 2 132690120 to 132690162 42 + TSS region transcription start site region 20315
Tssr20316 2 132691884 to 132691903 19 + TSS region transcription start site region 20316
Tssr20317 2 132691968 to 132691975 7 + TSS region transcription start site region 20317
Tssr20318 2 132691997 to 132692008 11 + TSS region transcription start site region 20318
Tssr20319 2 132692011 to 132692020 9 + TSS region transcription start site region 20319
Tssr20320 2 132692022 to 132692047 25 + TSS region transcription start site region 20320
Gm14097 2 132694741 to 132695305 564 - antisense lncRNA gene predicted gene 14097
Gm38455 2 132694811 to 132698893 4082 - lncRNA gene predicted gene, 38455
Tssr20321 2 132695924 to 132695931 7 + TSS region transcription start site region 20321
Tssr26482 2 132698502 to 132698526 24 - TSS region transcription start site region 26482
Gm22245 2 132717106 to 132717208 102 + snRNA gene predicted gene, 22245
Tssr20322 2 132724291 to 132724300 9 + TSS region transcription start site region 20322