Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:131944617-132825488

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173 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prn 2 131909957 to 131956130 46173 + protein coding gene prion protein readthrough transcript
Tssr20289 2 131950855 to 131950867 12 + TSS region transcription start site region 20289
Prnd 2 131950861 to 131956130 5269 + protein coding gene prion like protein doppel
Tssr20290 2 131951011 to 131951028 17 + TSS region transcription start site region 20290
Cpgi12297 2 131953092 to 131953549 457 CpG island CpG island 12297
Tssr26420 2 131954993 to 131955008 15 - TSS region transcription start site region 26420
Cpgi12298 2 131955343 to 131955565 222 CpG island CpG island 12298
Mdq14 2 131981644 to 131981644 0 QTL mammary ductal QTL 14
Tssr26421 2 131991649 to 131991695 46 - TSS region transcription start site region 26421
Rassf2 2 131992850 to 132030319 37469 - protein coding gene Ras association (RalGDS/AF-6) domain family member 2
Tssr26422 2 131993055 to 131993060 5 - TSS region transcription start site region 26422
Tssr26423 2 131993589 to 131993601 12 - TSS region transcription start site region 26423
Tssr26424 2 131994184 to 131994207 23 - TSS region transcription start site region 26424
Tssr26425 2 131994315 to 131994336 21 - TSS region transcription start site region 26425
Tssr26426 2 131994614 to 131994640 26 - TSS region transcription start site region 26426
Tssr26427 2 132002678 to 132002684 6 - TSS region transcription start site region 26427
Tssr662 2 132006782 to 132006811 29 + TSS region transcription start site region 662
Tssr26428 2 132007456 to 132007478 22 - TSS region transcription start site region 26428
Tssr26429 2 132019414 to 132019456 42 - TSS region transcription start site region 26429
Tssr26430 2 132019468 to 132019476 8 - TSS region transcription start site region 26430
Tssr26431 2 132020731 to 132020779 48 - TSS region transcription start site region 26431
Tssr26432 2 132021109 to 132021120 11 - TSS region transcription start site region 26432
Tssr26433 2 132021135 to 132021178 43 - TSS region transcription start site region 26433
Tssr26434 2 132021193 to 132021204 11 - TSS region transcription start site region 26434
Tssr26435 2 132021228 to 132021238 10 - TSS region transcription start site region 26435
Gm39939 2 132021258 to 132025798 4540 + lncRNA gene predicted gene, 39939
Tssr20291 2 132021284 to 132021297 13 + TSS region transcription start site region 20291
Tssr20292 2 132027660 to 132027684 24 + TSS region transcription start site region 20292
Tssr20293 2 132028344 to 132028354 10 + TSS region transcription start site region 20293
Cpgi12299 2 132029063 to 132030522 1459 CpG island CpG island 12299
Tssr26436 2 132029161 to 132029184 23 - TSS region transcription start site region 26436
Tssr26437 2 132029188 to 132029205 17 - TSS region transcription start site region 26437
Tssr26438 2 132029788 to 132029804 16 - TSS region transcription start site region 26438
Tssr26439 2 132029808 to 132029813 5 - TSS region transcription start site region 26439
Tssr26440 2 132029815 to 132029822 7 - TSS region transcription start site region 26440
Tssr26441 2 132029824 to 132029844 20 - TSS region transcription start site region 26441
Tssr26442 2 132029845 to 132029901 56 - TSS region transcription start site region 26442
Tssr20294 2 132029980 to 132029986 6 + TSS region transcription start site region 20294
Gm31179 2 132030405 to 132040385 9980 + lncRNA gene predicted gene, 31179
Slc23a2 2 132052496 to 132145108 92612 - protein coding gene solute carrier family 23 (nucleobase transporters), member 2
Tssr26443 2 132053289 to 132053302 13 - TSS region transcription start site region 26443
Tssr26444 2 132055927 to 132055944 17 - TSS region transcription start site region 26444
Tssr26445 2 132060780 to 132060792 12 - TSS region transcription start site region 26445
Tssr26446 2 132094175 to 132094204 29 - TSS region transcription start site region 26446
Tssr26447 2 132094587 to 132094608 21 - TSS region transcription start site region 26447
Tssr20295 2 132094718 to 132094744 26 + TSS region transcription start site region 20295
Gm14052 2 132099860 to 132100812 952 + pseudogene predicted gene 14052
Tssr26448 2 132102676 to 132102691 15 - TSS region transcription start site region 26448
Tssr26449 2 132103418 to 132103446 28 - TSS region transcription start site region 26449
Tssr26450 2 132103454 to 132103465 11 - TSS region transcription start site region 26450
Tssr26451 2 132111440 to 132111465 25 - TSS region transcription start site region 26451
Tssr26452 2 132111467 to 132111478 11 - TSS region transcription start site region 26452
Tssr26453 2 132111497 to 132111508 11 - TSS region transcription start site region 26453
Tssr26454 2 132112338 to 132112354 16 - TSS region transcription start site region 26454
Tssr26455 2 132114597 to 132114611 14 - TSS region transcription start site region 26455
Tssr26456 2 132118517 to 132118525 8 - TSS region transcription start site region 26456
Tssr26457 2 132118764 to 132118775 11 - TSS region transcription start site region 26457
Tssr26458 2 132120137 to 132120154 17 - TSS region transcription start site region 26458
Tssr26459 2 132127422 to 132127426 4 - TSS region transcription start site region 26459
Tssr26460 2 132128698 to 132128704 6 - TSS region transcription start site region 26460
Cpgi12300 2 132144303 to 132145548 1245 CpG island CpG island 12300
Gm14051 2 132144533 to 132220250 75717 + antisense lncRNA gene predicted gene 14051
Tssr26461 2 132145057 to 132145118 61 - TSS region transcription start site region 26461
Tssr26462 2 132145339 to 132145368 29 - TSS region transcription start site region 26462
Tssr26463 2 132146253 to 132146255 2 - TSS region transcription start site region 26463
Tssr20296 2 132151937 to 132151951 14 + TSS region transcription start site region 20296
Tssr20297 2 132212581 to 132212628 47 + TSS region transcription start site region 20297
Gm29720 2 132214953 to 132215329 376 - protein coding gene predicted gene, 29720
Tmem230 2 132239492 to 132247807 8315 - protein coding gene transmembrane protein 230
Cpgi12301 2 132247275 to 132248251 976 CpG island CpG island 12301
Tssr26464 2 132247623 to 132247644 21 - TSS region transcription start site region 26464
Tssr26465 2 132247667 to 132247698 31 - TSS region transcription start site region 26465
Tssr26466 2 132247747 to 132247787 40 - TSS region transcription start site region 26466
Tssr20298 2 132247843 to 132247863 20 + TSS region transcription start site region 20298
Pcna 2 132249286 to 132253180 3894 - protein coding gene proliferating cell nuclear antigen
Cpgi12302 2 132252505 to 132253560 1055 CpG island CpG island 12302
Tssr20299 2 132252785 to 132252819 34 + TSS region transcription start site region 20299
Tssr26467 2 132253077 to 132253103 26 - TSS region transcription start site region 26467
Tssr26468 2 132253174 to 132253217 43 - TSS region transcription start site region 26468
Tssr26469 2 132253227 to 132253236 9 - TSS region transcription start site region 26469
AV099323 2 132253246 to 132260927 7681 + antisense lncRNA gene expressed sequence AV099323
Tssr20300 2 132253349 to 132253388 39 + TSS region transcription start site region 20300
Tssr20301 2 132253391 to 132253435 44 + TSS region transcription start site region 20301
Cpgi12303 2 132262797 to 132263959 1162 CpG island CpG island 12303
Tssr20302 2 132263136 to 132263268 132 + TSS region transcription start site region 20302
Cds2 2 132263148 to 132312050 48902 + protein coding gene CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
Tssr20303 2 132263273 to 132263318 45 + TSS region transcription start site region 20303
Tssr20304 2 132263322 to 132263334 12 + TSS region transcription start site region 20304
Tssr20305 2 132263436 to 132263445 9 + TSS region transcription start site region 20305
Gm46766 2 132263504 to 132267647 4143 + lncRNA gene predicted gene, 46766
Cpgi12304 2 132264100 to 132264332 232 CpG island CpG island 12304
Tssr26470 2 132264213 to 132264224 11 - TSS region transcription start site region 26470
Tssr20306 2 132281154 to 132281197 43 + TSS region transcription start site region 20306
Tssr20307 2 132289398 to 132289410 12 + TSS region transcription start site region 20307
Prokr2 2 132369705 to 132385501 15796 - protein coding gene prokineticin receptor 2
D2Mit257 2 132370937 to 132371074 137 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 257
Ltpr2g 2 132370937 to 132371074 137 QTL Leishmania tropica response 2g
Ltpr2f 2 132370937 to 132371074 137 QTL Leishmania tropica response 2f
D2Dcr75 2 132370945 to 132371047 102 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 75
Cpgi12305 2 132373455 to 132374011 556 CpG island CpG island 12305
Cpgi12306 2 132384617 to 132385488 871 CpG island CpG island 12306
Tssr26471 2 132385392 to 132385434 42 - TSS region transcription start site region 26471
Tssr26472 2 132385435 to 132385448 13 - TSS region transcription start site region 26472
4921508D12Rik 2 132424741 to 132452499 27758 + lincRNA gene RIKEN cDNA 4921508D12 gene
Tssr26473 2 132455292 to 132455302 10 - TSS region transcription start site region 26473
Gm14095 2 132482516 to 132486590 4074 - lincRNA gene predicted gene 14095
1700058J15Rik 2 132489671 to 132490622 951 unclassified gene RIKEN cDNA 1700058J15 gene
Tssr20308 2 132490697 to 132490707 10 + TSS region transcription start site region 20308
Tssr20309 2 132490711 to 132490736 25 + TSS region transcription start site region 20309
1700026D11Rik 2 132490728 to 132524057 33329 + antisense lncRNA gene RIKEN cDNA 1700026D11 gene
Tssr26474 2 132512489 to 132512509 20 - TSS region transcription start site region 26474
Tssr26475 2 132513902 to 132513919 17 - TSS region transcription start site region 26475
Gpcpd1 2 132529082 to 132578258 49176 - protein coding gene glycerophosphocholine phosphodiesterase 1
E030016H06Rik 2 132559005 to 132561681 2676 unclassified gene RIKEN cDNA E030016H06 gene
Tssr26476 2 132574143 to 132574147 4 - TSS region transcription start site region 26476
Tssr20310 2 132576054 to 132576069 15 + TSS region transcription start site region 20310
Cpgi12307 2 132577460 to 132578526 1066 CpG island CpG island 12307
Tssr20311 2 132578022 to 132578034 12 + TSS region transcription start site region 20311
Tssr26477 2 132578128 to 132578153 25 - TSS region transcription start site region 26477
Tssr26478 2 132578155 to 132578222 67 - TSS region transcription start site region 26478
Tssr26479 2 132578244 to 132578255 11 - TSS region transcription start site region 26479
Tssr20312 2 132597448 to 132597461 13 + TSS region transcription start site region 20312
AU019990 2 132598196 to 132653067 54871 + lincRNA gene expressed sequence AU019990
Tssr20313 2 132599442 to 132599462 20 + TSS region transcription start site region 20313
Tssr663 2 132599504 to 132599525 21 + TSS region transcription start site region 663
Tssr26480 2 132601168 to 132601171 3 - TSS region transcription start site region 26480
Rpl23a-ps4 2 132662242 to 132662696 454 + pseudogene ribosomal protein L23A, pseudogene 4
Tssr26481 2 132670386 to 132670395 9 - TSS region transcription start site region 26481
Gm14099 2 132673376 to 132673979 603 - pseudogene predicted gene 14099
Gm14098 2 132678712 to 132679236 524 + pseudogene predicted gene 14098
Shld1 2 132686931 to 132751055 64124 + protein coding gene shieldin complex subunit 1
Tssr20314 2 132686944 to 132686982 38 + TSS region transcription start site region 20314
Cpgi12308 2 132686971 to 132687149 178 CpG island CpG island 12308
Tssr20315 2 132690120 to 132690162 42 + TSS region transcription start site region 20315
Tssr20316 2 132691884 to 132691903 19 + TSS region transcription start site region 20316
Tssr20317 2 132691968 to 132691975 7 + TSS region transcription start site region 20317
Tssr20318 2 132691997 to 132692008 11 + TSS region transcription start site region 20318
Tssr20319 2 132692011 to 132692020 9 + TSS region transcription start site region 20319
Tssr20320 2 132692022 to 132692047 25 + TSS region transcription start site region 20320
Gm14097 2 132694741 to 132695305 564 - antisense lncRNA gene predicted gene 14097
Gm38455 2 132694811 to 132698893 4082 - lncRNA gene predicted gene, 38455
Tssr20321 2 132695924 to 132695931 7 + TSS region transcription start site region 20321
Tssr26482 2 132698502 to 132698526 24 - TSS region transcription start site region 26482
Gm22245 2 132717106 to 132717208 102 + snRNA gene predicted gene, 22245
Tssr20322 2 132724291 to 132724300 9 + TSS region transcription start site region 20322
Tssr20323 2 132780706 to 132780730 24 + TSS region transcription start site region 20323
Chgb 2 132781278 to 132795072 13794 + protein coding gene chromogranin B
Cpgi12309 2 132781290 to 132781962 672 CpG island CpG island 12309
Tssr20324 2 132781419 to 132781426 7 + TSS region transcription start site region 20324
Tssr20325 2 132781437 to 132781446 9 + TSS region transcription start site region 20325
Tssr20326 2 132781449 to 132781460 11 + TSS region transcription start site region 20326
Tssr20327 2 132781605 to 132781629 24 + TSS region transcription start site region 20327
Tssr20328 2 132781636 to 132781650 14 + TSS region transcription start site region 20328
Tssr20329 2 132781662 to 132781678 16 + TSS region transcription start site region 20329
Tssr20330 2 132781701 to 132781716 15 + TSS region transcription start site region 20330
Tssr20331 2 132785975 to 132785988 13 + TSS region transcription start site region 20331
Tssr20332 2 132792434 to 132792469 35 + TSS region transcription start site region 20332
Tssr20333 2 132792528 to 132792542 14 + TSS region transcription start site region 20333
Tssr26483 2 132792609 to 132792622 13 - TSS region transcription start site region 26483
Tssr26484 2 132792623 to 132792657 34 - TSS region transcription start site region 26484
Tssr26485 2 132792659 to 132792702 43 - TSS region transcription start site region 26485
Tssr26486 2 132792812 to 132792881 69 - TSS region transcription start site region 26486
Tssr26487 2 132792887 to 132792894 7 - TSS region transcription start site region 26487
Tssr26488 2 132793330 to 132793383 53 - TSS region transcription start site region 26488
Tssr20334 2 132793367 to 132793379 12 + TSS region transcription start site region 20334
Tssr26489 2 132793529 to 132793540 11 - TSS region transcription start site region 26489
Trmt6 2 132804207 to 132816055 11848 - protein coding gene tRNA methyltransferase 6
Cpgi12310 2 132815626 to 132816561 935 CpG island CpG island 12310
Tssr26490 2 132815978 to 132816052 74 - TSS region transcription start site region 26490
Tssr20335 2 132816137 to 132816145 8 + TSS region transcription start site region 20335
Mcm8 2 132816141 to 132844197 28056 + protein coding gene minichromosome maintenance 8 homologous recombination repair factor
Tssr20336 2 132816148 to 132816168 20 + TSS region transcription start site region 20336
Tssr20337 2 132816169 to 132816207 38 + TSS region transcription start site region 20337